RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 PEX5P50542 639 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 RABGGTBP53611 331 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 BCAR1P56945 870 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 LLGL1Q15334 1064 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 PKN2Q16513 984 aaKnown RBP13.18□□□□□ -0.3
CAPN9-201ENST00000271971 FAM102AQ5T9C2 384 aaPredicted RBP13.18□□□□□ -0.3
CAPN9-201ENST00000271971 TMEM86AQ8N2M4 240 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 SLC35F5Q8WV83 523 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 VWCEQ96DN2 955 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 RNPC3Q96LT9 517 aaKnown RBP13.18□□□□□ -0.3
CAPN9-201ENST00000271971 UROC1Q96N76 676 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 B3GNT5Q9BYG0 378 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 PRDM5Q9NQX1 630 aaPredicted RBP13.18□□□□□ -0.3
CAPN9-201ENST00000271971 HPCAL4Q9UM19 191 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 NLRC5Q86WI3 1866 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 PTPRDP23468 1912 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 MYBPHLA2RUH7 354 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 MIF4GDA9UHW6 222 aaKnown RBP13.17□□□□□ -0.3
CAPN9-201ENST00000271971 F8VP50 259 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 GRAP2O75791 330 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 KRT3P12035 628 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 PBX3P40426 434 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 SSR1P43307 286 aaKnown RBP13.17□□□□□ -0.3
CAPN9-201ENST00000271971 GABRB2P47870 512 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 BCAT1P54687 386 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 TAS2R40P59535 323 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 BST2Q10589 180 aaKnown RBP13.17□□□□□ -0.3
CAPN9-201ENST00000271971 KCTD19Q17RG1 926 aaPredicted RBP13.17□□□□□ -0.3
CAPN9-201ENST00000271971 OR6B2Q6IFH4 312 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.17□□□□□ -0.3
CAPN9-201ENST00000271971 PAQR9Q6ZVX9 377 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 ZNF572Q7Z3I7 529 aaPredicted RBP13.17□□□□□ -0.3
CAPN9-201ENST00000271971 ADAT2Q7Z6V5 191 aaKnown RBP13.17□□□□□ -0.3
CAPN9-201ENST00000271971 UBL4BQ8N7F7 174 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 ANKRD52Q8NB46 1076 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 CASD1Q96PB1 797 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 AP1M1Q9BXS5 423 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.17□□□□□ -0.3
CAPN9-201ENST00000271971 M0QZQ0 153 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 PGRMC1O00264 195 aaKnown RBP13.17□□□□□ -0.3
CAPN9-201ENST00000271971 CES2O00748 559 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 BEST1O76090 585 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 UPP2O95045 317 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 LHX1P48742 406 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 TAF5Q15542 800 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 DCLRE1AQ6PJP8 1040 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 ANKLE1Q8NAG6 615 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 CLEC4CQ8WTT0 213 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 RUBCNQ92622 972 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 FAM193BQ96PV7 902 aaPredicted RBP13.17□□□□□ -0.3
CAPN9-201ENST00000271971 TMEM209Q96SK2 561 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 MED10Q9BTT4 135 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 RHOBTB2Q9BYZ6 727 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 MIS12Q9H081 205 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 CARD9Q9H257 536 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 ELAC1Q9H777 363 aaKnown RBP13.17□□□□□ -0.3
CAPN9-201ENST00000271971 LTBP2Q14767 1821 aa13.17□□□□□ -0.3
CAPN9-201ENST00000271971 SIGLEC16A6NMB1 481 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 FGGP02679 453 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 PYGMP11217 842 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 CTNNA2P26232 953 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 GSCP56915 257 aaPredicted RBP13.16□□□□□ -0.3
CAPN9-201ENST00000271971 SCUBE3Q8IX30 993 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 CRIPAKQ8N1N5 446 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 OR10T2Q8NGX3 314 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.16□□□□□ -0.3
CAPN9-201ENST00000271971 ACTRT1Q8TDG2 376 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 MCRS1Q96EZ8 462 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 PCED1BQ96HM7 432 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 SUSD3Q96L08 255 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.16□□□□□ -0.3
CAPN9-201ENST00000271971 SLC4A5Q9BY07 1137 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 PLEKHA4Q9H4M7 779 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 NRDE2Q9H7Z3 1164 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 KRT82Q9NSB4 513 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 TMEM30AQ9NV96 361 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 KLHL11Q9NVR0 708 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 IP6K2Q9UHH9 426 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 PCDHA3Q9Y5H8 950 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 TBKBP1A7MCY6 615 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 PAPSS1O43252 624 aaPredicted RBP13.16□□□□□ -0.3
CAPN9-201ENST00000271971 LCP1P13796 627 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 PSMA2P25787 234 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 CACNA2D1P54289 1103 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 ZNF268Q14587 947 aaPredicted RBP13.16□□□□□ -0.3
CAPN9-201ENST00000271971 TRNP1Q6NT89 227 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 TMCO2Q7Z6W1 182 aaPredicted RBP13.16□□□□□ -0.3
CAPN9-201ENST00000271971 RASGEF1CQ8N431 466 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 HNRNPABQ99729 332 aaKnown RBP13.16□□□□□ -0.3
CAPN9-201ENST00000271971 HINFPQ9BQA5 517 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 WDR35Q9P2L0 1181 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 KANSL3Q9P2N6 904 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 ALPK3Q96L96 1907 aa13.16□□□□□ -0.3
CAPN9-201ENST00000271971 TRIM43BA6NCK2 446 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 A6NNZ2 444 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 CYP11A1P05108 521 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 SETSIPP0DME0 302 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 SLC1A1P43005 524 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 TUBB8Q3ZCM7 444 aa13.15□□□□□ -0.3
CAPN9-201ENST00000271971 OVOS1Q6IE37 1185 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms