RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 DPYSL4O14531 572 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 GPR182O15218 404 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 PAPSS1O43252 624 aaPredicted RBP17.46■□□□□ 0.39
CCDC40-201ENST00000269318 HUS1O60921 280 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 RNF8O76064 485 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 TRUB2O95900 331 aaKnown RBP17.46■□□□□ 0.39
CCDC40-201ENST00000269318 ITIH2P19823 946 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 KDELR1P24390 212 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 MLH1P40692 756 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 PMS2P54278 862 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 CALCOCO2Q13137 446 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 CEP85LQ5SZL2 805 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 CYP4V2Q6ZWL3 525 aaPredicted RBP17.46■□□□□ 0.39
CCDC40-201ENST00000269318 OSTM1Q86WC4 334 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 FAM76AQ8TAV0 307 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 SNF8Q96H20 258 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 CAPNS2Q96L46 248 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 PABPC3Q9H361 631 aaKnown RBP17.46■□□□□ 0.39
CCDC40-201ENST00000269318 DNPEPQ9ULA0 475 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 USP18Q9UMW8 372 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 PDGFRAP16234 1089 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 IGFBP6P24592 240 aaPredicted RBP17.46■□□□□ 0.39
CCDC40-201ENST00000269318 KLRC2P26717 231 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 THPOP40225 353 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 AFF1P51825 1210 aaKnown RBP17.46■□□□□ 0.39
CCDC40-201ENST00000269318 BCAT1P54687 386 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 SLC6A3Q01959 620 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 BST2Q10589 180 aaKnown RBP17.46■□□□□ 0.39
CCDC40-201ENST00000269318 TAF5Q15542 800 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 SH3PXD2AQ5TCZ1 1133 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 MRPL10Q7Z7H8 261 aaKnown RBP17.46■□□□□ 0.39
CCDC40-201ENST00000269318 ZDHHC17Q8IUH5 632 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 REM2Q8IYK8 340 aaPredicted RBP17.46■□□□□ 0.39
CCDC40-201ENST00000269318 PEBP4Q96S96 227 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 GAD1Q99259 594 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 CFHR5Q9BXR6 569 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 TSPYL2Q9H2G4 693 aaPredicted RBP17.46■□□□□ 0.39
CCDC40-201ENST00000269318 TMBIM4Q9HC24 238 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 SLC38A7Q9NVC3 462 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 MIOSQ9NXC5 875 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 SRRDQ9UH36 339 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 PCSK1NQ9UHG2 260 aa17.46■□□□□ 0.39
CCDC40-201ENST00000269318 HTTP42858 3142 aa17.45■□□□□ 0.38
CCDC40-201ENST00000269318 GRAP2O75791 330 aa17.45■□□□□ 0.38
CCDC40-201ENST00000269318 MYCNP04198 464 aaPredicted RBP17.45■□□□□ 0.38
CCDC40-201ENST00000269318 FAM163BP0C2L3 166 aa17.45■□□□□ 0.38
CCDC40-201ENST00000269318 BYSLQ13895 437 aaKnown RBP17.45■□□□□ 0.38
CCDC40-201ENST00000269318 TRIP13Q15645 432 aaPredicted RBP17.45■□□□□ 0.38
CCDC40-201ENST00000269318 OASLQ15646 514 aaKnown RBP17.45■□□□□ 0.38
CCDC40-201ENST00000269318 CCDC14Q49A88 953 aa17.45■□□□□ 0.38
CCDC40-201ENST00000269318 RAB6CQ53S08 254 aa17.45■□□□□ 0.38
CCDC40-201ENST00000269318 AGMOQ6ZNB7 445 aa17.45■□□□□ 0.38
CCDC40-201ENST00000269318 SCUBE3Q8IX30 993 aa17.45■□□□□ 0.38
CCDC40-201ENST00000269318 HACE1Q8IYU2 909 aa17.45■□□□□ 0.38
CCDC40-201ENST00000269318 PCSK9Q8NBP7 692 aaKnown RBP17.45■□□□□ 0.38
CCDC40-201ENST00000269318 LPPQ93052 612 aa17.45■□□□□ 0.38
CCDC40-201ENST00000269318 NKD2Q969F2 451 aaPredicted RBP17.45■□□□□ 0.38
CCDC40-201ENST00000269318 TRAIPQ9BWF2 469 aa17.45■□□□□ 0.38
CCDC40-201ENST00000269318 RAB6CQ9H0N0 254 aa17.45■□□□□ 0.38
CCDC40-201ENST00000269318 CD48P09326 243 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 NUDT17P0C025 328 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 ATF2P15336 505 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 ADORA2BP29275 332 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 SNX16P57768 344 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 LMNB2Q03252 620 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 TRIM71Q2Q1W2 868 aaKnown RBP17.44■□□□□ 0.38
CCDC40-201ENST00000269318 C15orf59Q2T9L4 293 aaPredicted RBP17.44■□□□□ 0.38
CCDC40-201ENST00000269318 CCDC89Q8N998 374 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 SLC2A14Q8TDB8 520 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 ATP6V1G3Q96LB4 118 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 B3GNT5Q9BYG0 378 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 CYLDQ9NQC7 956 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 AAASQ9NRG9 546 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 PADI3Q9ULW8 664 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 DRG1Q9Y295 367 aaKnown RBP17.44■□□□□ 0.38
CCDC40-201ENST00000269318 GIT1Q9Y2X7 761 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 ARL5CA6NH57 179 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 CYB561D2O14569 222 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 GABRDO14764 452 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 MGEA5O60502 916 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 ENDOD1O94919 500 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 THP07101 528 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 RARGP13631 454 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 TKTP29401 623 aaKnown RBP17.44■□□□□ 0.38
CCDC40-201ENST00000269318 CD52P31358 61 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 LMAN1P49257 510 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 VCPP55072 806 aaKnown RBP17.44■□□□□ 0.38
CCDC40-201ENST00000269318 DSC3Q14574 896 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 SLMAPQ14BN4 828 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 DEFB115Q30KQ5 88 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 KCTD16Q68DU8 428 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 BBS12Q6ZW61 710 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 ZNF365Q70YC5 407 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 SH2D3CQ8N5H7 860 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 B3GALNT2Q8NCR0 500 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 SLC35B2Q8TB61 432 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 TNIP3Q96KP6 325 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 CACNG4Q9UBN1 327 aa17.44■□□□□ 0.38
CCDC40-201ENST00000269318 DDX20Q9UHI6 824 aaKnown RBP17.44■□□□□ 0.38
CCDC40-201ENST00000269318 ZNF623O75123 536 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms