RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 PLEKHG4Q58EX7 1191 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 FAM160B1Q5W0V3 765 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 METTL7BQ6UX53 244 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 CYP4V2Q6ZWL3 525 aaPredicted RBP13.04□□□□□ -0.32
BEST3-201ENST00000266661 BANPQ8N9N5 519 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 GIMAP7Q8NHV1 300 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 ZNF398Q8TD17 642 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 FBF1Q8TES7 1133 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 INPP5DQ92835 1189 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 ERP27Q96DN0 273 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 MCRS1Q96EZ8 462 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 CPXM1Q96SM3 734 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 PAIP2Q9BPZ3 127 aaKnown RBP13.04□□□□□ -0.32
BEST3-201ENST00000266661 TLE6Q9H808 572 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 BTBD7Q9P203 1132 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 NUMBLQ9Y6R0 609 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.04□□□□□ -0.32
BEST3-201ENST00000266661 LOC102724159A0A0B4J2E5 919 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 GOLGA8SH3BPF8 625 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 GOLGA8MH3BSY2 632 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 C2CD2LO14523 706 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 GAS2O43903 313 aaKnown RBP13.04□□□□□ -0.32
BEST3-201ENST00000266661 FAM155BO75949 473 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 IFNB1P01574 187 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 C1QAP02745 245 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 ERBB2P04626 1255 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 DHRS4L1P0CG22 281 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 TGFB3P10600 412 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 KRT4P19013 534 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 POLR2BP30876 1174 aaKnown RBP13.04□□□□□ -0.32
BEST3-201ENST00000266661 TCF7P36402 384 aaPredicted RBP13.04□□□□□ -0.32
BEST3-201ENST00000266661 MYO1EQ12965 1108 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 PWP2Q15269 919 aaKnown RBP13.04□□□□□ -0.32
BEST3-201ENST00000266661 CTC1Q2NKJ3 1217 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 SLC45A4Q5BKX6 768 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 ZFYVE27Q5T4F4 411 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 LVRNQ6Q4G3 990 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 MPZL3Q6UWV2 235 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 ERO1BQ86YB8 467 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 RIOX2Q8IUF8 465 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 AGGF1Q8N302 714 aaeCLIP13.04□□□□□ -0.32
BEST3-201ENST00000266661 LRRC8CQ8TDW0 803 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 PYROXD1Q8WU10 500 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 NSMCE1Q8WV22 266 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 N4BP2L2Q92802 583 aaPredicted RBP13.04□□□□□ -0.32
BEST3-201ENST00000266661 PAFAH2Q99487 392 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 ETNK1Q9HBU6 452 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 NOP53Q9NZM5 478 aaKnown RBP13.04□□□□□ -0.32
BEST3-201ENST00000266661 WDR35Q9P2L0 1181 aa13.04□□□□□ -0.32
BEST3-201ENST00000266661 ANK1P16157 1881 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 APOC4-APOC2K7ER74 178 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 PEX10O60683 326 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 DCTN3O75935 186 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 APOC2P02655 101 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 PLCB3Q01970 1234 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 TRPC3Q13507 836 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 MXD4Q14582 209 aaPredicted RBP13.03□□□□□ -0.32
BEST3-201ENST00000266661 ACAP1Q15027 740 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 SMTNL2Q2TAL5 461 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 KCNT1Q5JUK3 1230 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 EEF1DP3Q658K8 133 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 SCARA5Q6ZMJ2 495 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 CAPN12Q6ZSI9 719 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 C3orf62Q6ZUJ4 267 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 IGDCC3Q8IVU1 814 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 GPATCH11Q8N954 259 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 SLC4A11Q8NBS3 891 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 FBXO36Q8NEA4 188 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 MS4A4AQ96JQ5 239 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 FAM167AQ96KS9 214 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 LRRC37BQ96QE4 947 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 PTPN18Q99952 460 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 TCHPQ9BT92 498 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 VPS11Q9H270 941 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 ZWILCHQ9H900 591 aa13.03□□□□□ -0.32
BEST3-201ENST00000266661 ACKR2O00590 384 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 TRUB2O95900 331 aaKnown RBP13.02□□□□□ -0.32
BEST3-201ENST00000266661 SRGAP2CP0DJJ0 459 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 GNAZP19086 355 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 ADRA1DP25100 572 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 PHBP35232 272 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 ETV4P43268 484 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 PSMC1P62191 440 aaKnown RBP13.02□□□□□ -0.32
BEST3-201ENST00000266661 DYNLT1P63172 113 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 TFAMQ00059 246 aaKnown RBP13.02□□□□□ -0.32
BEST3-201ENST00000266661 SETDB1Q15047 1291 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 TAF5Q15542 800 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 HADHQ16836 314 aaKnown RBP13.02□□□□□ -0.32
BEST3-201ENST00000266661 KLHL38Q2WGJ6 581 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 HHATQ5VTY9 493 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 EMC1Q8N766 993 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 CEP120Q8N960 986 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 RNF149Q8NC42 400 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 ALKBH8Q96BT7 664 aaKnown RBP13.02□□□□□ -0.32
BEST3-201ENST00000266661 THOC1Q96FV9 657 aaKnown RBP13.02□□□□□ -0.32
BEST3-201ENST00000266661 ZNF570Q96NI8 536 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 TWNKQ96RR1 684 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 GPR20Q99678 358 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 ELOVL4Q9GZR5 314 aa13.02□□□□□ -0.32
BEST3-201ENST00000266661 C2orf40Q9H1Z8 148 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms