RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 DLGAP2Q9P1A6 1054 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 THSD7AQ9UPZ6 1657 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 CCDC189A1A4V9 331 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 INO80B-WBP1J3KQ70 363 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 ZC3H11AO75152 810 aaKnown RBP eCLIP17.57■□□□□ 0.41e-7■□□□□ 9.5
SQLE-201ENST00000265896 ERBB2P04626 1255 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 SUPT20HL2P0C7V6 817 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 DPEP1P16444 411 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 MIPP30301 263 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 RFC5P40937 340 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 CRADDP78560 199 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 LY6KQ17RY6 165 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 SUPT20HL1Q3ZLR7 823 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 RNF220Q5VTB9 566 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 NIM1KQ8IY84 436 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 PDIK1LQ8N165 341 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 HIPK4Q8NE63 616 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 TTC25Q96NG3 672 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 TIPINQ9BVW5 301 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 INO80BQ9C086 356 aaPredicted RBP17.57■□□□□ 0.4
SQLE-201ENST00000265896 SMYD3Q9H7B4 428 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 PCDH9Q9HC56 1237 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 ACSS2Q9NR19 701 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 NMRK1Q9NWW6 199 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 AFG3L2Q9Y4W6 797 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 MAD1L1Q9Y6D9 718 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 LAMA3Q16787 3333 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 OATP04181 439 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 INHBAP08476 426 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 ABHD2P08910 425 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 CXCL8P10145 99 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 CDH6P55285 790 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 SLC8A3P57103 927 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 THOC5Q13769 683 aaKnown RBP17.57■□□□□ 0.4
SQLE-201ENST00000265896 CTC1Q2NKJ3 1217 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 PPIL6Q8IXY8 311 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 SLC35B2Q8TB61 432 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 PORCNQ9H237 461 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 ACTL7BQ9Y614 415 aa17.57■□□□□ 0.4
SQLE-201ENST00000265896 C3orf70A6NLC5 250 aaPredicted RBP17.56■□□□□ 0.4
SQLE-201ENST00000265896 TRIM49D1C9J1S8 452 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 KIF1CO43896 1103 aaKnown RBP17.56■□□□□ 0.4
SQLE-201ENST00000265896 PLA2G6O60733 806 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 ASS1P00966 412 aaKnown RBP17.56■□□□□ 0.4
SQLE-201ENST00000265896 APRTP07741 180 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 KDELR1P24390 212 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 PPP6R3Q5H9R7 873 aaPredicted RBP17.56■□□□□ 0.4
SQLE-201ENST00000265896 EFHC2Q5JST6 749 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 MROH9Q5TGP6 573 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 CES4AQ5XG92 561 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 EEF1DP3Q658K8 133 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 TMEM154Q6P9G4 183 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 ARID3BQ8IVW6 561 aaPredicted RBP17.56■□□□□ 0.4
SQLE-201ENST00000265896 ZNF276Q8N554 614 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 NAT8LQ8N9F0 302 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 USP6NLQ92738 828 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 FAF2Q96CS3 445 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 TEPSINQ96N21 525 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 TRIM55Q9BYV6 548 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 DEFB129Q9H1M3 183 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 FARP1Q9Y4F1 1045 aaPredicted RBP17.56■□□□□ 0.4
SQLE-201ENST00000265896 USP1O94782 785 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 GRIA1P42261 906 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 ALDH18A1P54886 795 aaKnown RBP17.56■□□□□ 0.4
SQLE-201ENST00000265896 DNAJC9Q8WXX5 260 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 FAM161BQ96MY7 647 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 PEBP4Q96S96 227 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 LPIN3Q9BQK8 851 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 CEP41Q9BYV8 373 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 PPARGC1AQ9UBK2 798 aaKnown RBP17.56■□□□□ 0.4
SQLE-201ENST00000265896 PGAP2Q9UHJ9 254 aa17.56■□□□□ 0.4
SQLE-201ENST00000265896 ZNF214Q9UL59 606 aaPredicted RBP17.56■□□□□ 0.4
SQLE-201ENST00000265896 BAG2O95816 211 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 ESRRAP11474 423 aaPredicted RBP17.55■□□□□ 0.4
SQLE-201ENST00000265896 PTPN4P29074 926 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 SLC25A11Q02978 314 aaKnown RBP17.55■□□□□ 0.4
SQLE-201ENST00000265896 ZC3H12AQ5D1E8 599 aaKnown RBP17.55■□□□□ 0.4
SQLE-201ENST00000265896 FAM102AQ5T9C2 384 aaPredicted RBP17.55■□□□□ 0.4
SQLE-201ENST00000265896 C4orf50Q6ZRC1 276 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 PDCD7Q8N8D1 485 aaKnown RBP17.55■□□□□ 0.4
SQLE-201ENST00000265896 C12orf29Q8N999 325 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 BANPQ8N9N5 519 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 PHC3Q8NDX5 983 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 LPAR1Q92633 364 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 MAGEB2O15479 319 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 TBX10O75333 385 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 CALB1P05937 261 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 UBTFL6P0CB48 400 aaPredicted RBP17.55■□□□□ 0.4
SQLE-201ENST00000265896 EN1Q05925 392 aaPredicted RBP17.55■□□□□ 0.4
SQLE-201ENST00000265896 PEX6Q13608 980 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 SNX30Q5VWJ9 437 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 TRIM72Q6ZMU5 477 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 SPDYE1Q8NFV5 336 aaPredicted RBP17.55■□□□□ 0.4
SQLE-201ENST00000265896 CCDC110Q8TBZ0 833 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 JDP2Q8WYK2 163 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 IQCGQ9H095 443 aaKnown RBP17.55■□□□□ 0.4
SQLE-201ENST00000265896 KCNK13Q9HB14 408 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 TAS2R1Q9NYW7 299 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 ZFATQ9P243 1243 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms