RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 GRAPLQ8TC17 118 aaPredicted RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 ACTRT1Q8TDG2 376 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 HDAC7Q8WUI4 952 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 DPF2Q92785 391 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 TAMM41Q96BW9 452 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 ULK4Q96C45 1275 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 OTUB1Q96FW1 271 aaPredicted RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 HEMGNQ9BXL5 484 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 PSTPIP1O43586 416 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 PRKACBP22694 351 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 PLOD1Q02809 727 aaPredicted RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 FMR1Q06787 632 aaKnown RBP eCLIP5.91□□□□□ -1.46
VCAN-201ENST00000265077 ZNF570Q96NI8 536 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 RNF38Q9H0F5 515 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 FANCEQ9HB96 536 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 FBXO28Q9NVF7 368 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 MROH7-TTC4A0A0A0MT08 1334 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 EMSYQ7Z589 1322 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 FMN2Q9NZ56 1722 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 GSG1L2A8MUP6 293 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 TNPO2O14787 897 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 IREB2P48200 963 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 ARHGEF6Q15052 776 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 IMPG1Q17R60 797 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 GADL1Q6ZQY3 521 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 PRPF39Q86UA1 669 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 TTC30AQ86WT1 665 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 NEDD1Q8NHV4 660 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 RMDN3Q96TC7 470 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 GPATCH1Q9BRR8 931 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 FRMD8P1Q9BZ68 369 aaPredicted RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 AP5M1Q9H0R1 490 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 MAP3K20Q9NYL2 800 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 PAK5Q9P286 719 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 PIKFYVEQ9Y2I7 2098 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 NOS1APO75052 506 aaPredicted RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 H2AFYO75367 372 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 LINGO3P0C6S8 592 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 UCHL3P15374 230 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 DRD4P21917 467 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 EFNA5P52803 228 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 OXCT1P55809 520 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 TSTA3Q13630 321 aaPredicted RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 ZNF746Q6NUN9 644 aaPredicted RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 IYDQ6PHW0 289 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 DSTYKQ6XUX3 929 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 DPP9Q86TI2 863 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 TSPAN14Q8NG11 270 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 MRPL4Q9BYD3 311 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 UBXN6Q9BZV1 441 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 N6AMT1Q9Y5N5 214 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 GTPBP10A4D1E9 387 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 BTN3A3O00478 584 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 PHKA2P46019 1235 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 HSD17B4P51659 736 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 BNC1Q01954 994 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 CYP4V2Q6ZWL3 525 aaPredicted RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 GLYCTKQ8IVS8 523 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 APOL4Q9BPW4 351 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 GINS4Q9BRT9 223 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 PAGR1Q9BTK6 254 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 DCP1AQ9NPI6 582 aaPredicted RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 XPO7Q9UIA9 1087 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 CDV3Q9UKY7 258 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 PREX1Q8TCU6 1659 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 SAC3D1A6NKF1 404 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 ENTPD5O75356 428 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 ACAP1Q15027 740 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 EFHC1Q5JVL4 640 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 CCDC28AQ8IWP9 274 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 MAGED4Q96JG8 741 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 EIF2AK1Q9BQI3 630 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 FAM213AQ9BRX8 229 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 TRIM8Q9BZR9 551 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 WBP11Q9Y2W2 641 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 ARHGEF17Q96PE2 2063 aaPredicted RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 ANKRD33BA6NCL7 494 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 PRR23AA6NEV1 266 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 APRTP07741 180 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 LYNP07948 512 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 GPC3P51654 580 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 ATN1P54259 1190 aaPredicted RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 CDH6P55285 790 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 ZC2HC1CQ53FD0 456 aaPredicted RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 ARMCX4Q5H9R4 360 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 ZBTB33Q86T24 672 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 APBB2Q92870 758 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 MRPL9Q9BYD2 267 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 MYLK2Q9H1R3 596 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 FKBP14Q9NWM8 211 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 VPS4AQ9UN37 437 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 NCOR1O75376 2440 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 TRPC5OSA6NMA1 111 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 SORBS3O60504 671 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 TSC22D2O75157 780 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 PHC1P78364 1004 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 TRIM28Q13263 835 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 NCOA4Q13772 614 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 EPHA10Q5JZY3 1008 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 FAM102AQ5T9C2 384 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms