RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 GRIK3Q13003 919 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 MAPK7Q13164 816 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 AGBL2Q5U5Z8 902 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 MICALCLQ6ZW33 695 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 GPIHBP1Q8IV16 184 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 SMG8Q8ND04 991 aaKnown RBP10.21□□□□□ -0.77
TTC39A-201ENST00000262675 BCAS4Q8TDM0 211 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 PIK3R5Q8WYR1 880 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 SMG7Q92540 1137 aaKnown RBP10.21□□□□□ -0.77
TTC39A-201ENST00000262675 TMEM143Q96AN5 459 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 ARL8AQ96BM9 186 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 SHDQ96IW2 340 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 AGPAT1Q99943 283 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 GPR88Q9GZN0 384 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 PIDD1Q9HB75 910 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 TMBIM4Q9HC24 238 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 CHST7Q9NS84 486 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 RASAL2Q9UJF2 1139 aa10.21□□□□□ -0.77
TTC39A-201ENST00000262675 A0A087WUV0 522 aaPredicted RBP10.21□□□□□ -0.78
TTC39A-201ENST00000262675 K7ENM7 598 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 TSPAN1O60635 241 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 MTA2O94776 668 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 FAM153BP0C7A2 387 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 NR1D1P20393 614 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 DNA2P51530 1060 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 CYP2J2P51589 502 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 VAMP7P51809 220 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 GTF2BQ00403 316 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 FAM153CQ494X1 144 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 GLYCTKQ8IVS8 523 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 UBL4BQ8N7F7 174 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 XXYLT1Q8NBI6 393 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 LMO3Q8TAP4 145 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 SH2D3AQ9BRG2 576 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 SLC2A4RGQ9NR83 387 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 MARCH5Q9NX47 278 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 FAM153AQ9UHL3 310 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 KCNG1Q9UIX4 513 aa10.21□□□□□ -0.78
TTC39A-201ENST00000262675 AJAP1Q9UKB5 411 aaPredicted RBP10.21□□□□□ -0.78
TTC39A-201ENST00000262675 ESYT3A0FGR9 886 aa10.2□□□□□ -0.78
TTC39A-201ENST00000262675 BUB1BO60566 1050 aaPredicted RBP10.2□□□□□ -0.78
TTC39A-201ENST00000262675 POU2F2P09086 479 aa10.2□□□□□ -0.78
TTC39A-201ENST00000262675 HNRNPA1P09651 372 aaKnown RBP eCLIP10.2□□□□□ -0.78
TTC39A-201ENST00000262675 ECHS1P30084 290 aa10.2□□□□□ -0.78
TTC39A-201ENST00000262675 ELAVL2Q12926 359 aaKnown RBP10.2□□□□□ -0.78
TTC39A-201ENST00000262675 CBWD6Q4V339 395 aa10.2□□□□□ -0.78
TTC39A-201ENST00000262675 CBWD3Q5JTY5 395 aa10.2□□□□□ -0.78
TTC39A-201ENST00000262675 CBWD5Q5RIA9 395 aa10.2□□□□□ -0.78
TTC39A-201ENST00000262675 SLC27A1Q6PCB7 646 aa10.2□□□□□ -0.78
TTC39A-201ENST00000262675 OLIG1Q8TAK6 271 aa10.2□□□□□ -0.78
TTC39A-201ENST00000262675 PRKD2Q9BZL6 878 aa10.2□□□□□ -0.78
TTC39A-201ENST00000262675 SMOC2Q9H3U7 446 aa10.2□□□□□ -0.78
TTC39A-201ENST00000262675 MINDY3Q9H8M7 445 aa10.2□□□□□ -0.78
TTC39A-201ENST00000262675 C17orf75Q9HAS0 396 aa10.2□□□□□ -0.78
TTC39A-201ENST00000262675 PARP2Q9UGN5 583 aa10.2□□□□□ -0.78
TTC39A-201ENST00000262675 ADAM28Q9UKQ2 775 aa10.2□□□□□ -0.78
TTC39A-201ENST00000262675 PLAAQ9Y263 795 aa10.2□□□□□ -0.78
TTC39A-201ENST00000262675 PRG3Q9Y2Y8 225 aaPredicted RBP10.2□□□□□ -0.78
TTC39A-201ENST00000262675 INO80B-WBP1J3KQ70 363 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 STK25O00506 426 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 PODXLO00592 558 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 C2CD2LO14523 706 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 DDX3YO15523 660 aaKnown RBP10.19□□□□□ -0.78
TTC39A-201ENST00000262675 B4GALT3O60512 393 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 RTN2O75298 545 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 KRT14P02533 472 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 LMNAP02545 664 aaKnown RBP10.19□□□□□ -0.78
TTC39A-201ENST00000262675 SCP2P22307 547 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 HOXA9P31269 272 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 HSD17B3P37058 310 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 MLH1P40692 756 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 ID4P47928 161 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 RARRES1P49788 294 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 GUCY2FP51841 1108 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 GPC5P78333 572 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 POU5F1Q01860 360 aaKnown RBP10.19□□□□□ -0.78
TTC39A-201ENST00000262675 FUT10Q6P4F1 479 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 GJB7Q6PEY0 223 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 MTSS1LQ765P7 747 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 DAW1Q8N136 415 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 SLC44A3Q8N4M1 653 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 GAD1Q99259 594 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 EPN3Q9H201 632 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 SF3B1O75533 1304 aaKnown RBP eCLIP10.19□□□□□ -0.78
TTC39A-201ENST00000262675 TRIOO75962 3097 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 ZSCAN5CA6NGD5 496 aaPredicted RBP10.19□□□□□ -0.78
TTC39A-201ENST00000262675 ANHXE9PGG2 379 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 CPP00450 1065 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 FGGP02679 453 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 LAMP2P13473 410 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 CHRNA3P32297 505 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 GTF2H1P32780 548 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 CTNNA1P35221 906 aaKnown RBP10.19□□□□□ -0.78
TTC39A-201ENST00000262675 SMTNP53814 917 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 NCKAP1LP55160 1127 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 RNASE9P60153 205 aaKnown RBP10.19□□□□□ -0.78
TTC39A-201ENST00000262675 MRPS25P82663 173 aaKnown RBP10.19□□□□□ -0.78
TTC39A-201ENST00000262675 CEP85LQ5SZL2 805 aa10.19□□□□□ -0.78
TTC39A-201ENST00000262675 RSPO2Q6UXX9 243 aaPredicted RBP10.19□□□□□ -0.78
TTC39A-201ENST00000262675 APBB1IPQ7Z5R6 666 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms