RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 SLC18A1P54219 525 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 SEPT7Q16181 437 aaKnown RBP17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 ADGRD1Q6QNK2 874 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 MTDHQ86UE4 582 aaKnown RBP17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 ZBTB8OSQ8IWT0 167 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 ZNF276Q8N554 614 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 UBA3Q8TBC4 463 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 SPATA18Q8TC71 538 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 MZB1Q8WU39 189 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 DCAKDQ8WVC6 231 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 SLC7A6OSQ96CW6 309 aaPredicted RBP17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 ZNF570Q96NI8 536 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 ACSS3Q9H6R3 686 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 STRIP2Q9ULQ0 834 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 ZMYND8Q9ULU4 1186 aaPredicted RBP17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 GRAP2O75791 330 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 TNNC2P02585 160 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 PGK2P07205 417 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 GM2AP17900 193 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 EPHB2P29323 1055 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 POLR2BP30876 1174 aaKnown RBP17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 GCLCP48506 637 aaPredicted RBP17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 ATF7IP2Q5U623 682 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 IER5Q5VY09 327 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 CDCA2Q69YH5 1023 aaPredicted RBP17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 PCGF5Q86SE9 256 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 ANKRD36BP1Q96IX9 119 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 PIWIL1Q96J94 861 aaKnown RBP17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 PEBP4Q96S96 227 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 TBC1D10AQ9BXI6 508 aa17.13■□□□□ 0.33
TM9SF1-201ENST00000261789 A0A1B0GUA9 196 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 PHBP35232 272 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 ELK3P41970 407 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 CLCN3P51790 818 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 GRM1Q13255 1194 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 NAA25Q14CX7 972 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 CDO1Q16878 200 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 MPZL3Q6UWV2 235 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 NLRP9Q7RTR0 991 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 LRRC6Q86X45 466 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 C1orf127Q8N9H9 656 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 SLC4A11Q8NBS3 891 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 CHST13Q8NET6 341 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 LRMDAQ9H2I8 198 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 CYLDQ9NQC7 956 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 GGA3Q9NZ52 723 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 KANSL3Q9P2N6 904 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 USP18Q9UMW8 372 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 ITGB3P05106 788 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 ALDH3A1P30838 453 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 DPYSL3Q14195 570 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 METTL7BQ6UX53 244 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 RPAINQ86UA6 219 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 PDIK1LQ8N165 341 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 RSRC1Q96IZ7 334 aaKnown RBP17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 ELOVL4Q9GZR5 314 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 PTPRHQ9HD43 1115 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 CENPFP49454 3210 aa17.12■□□□□ 0.33
TM9SF1-201ENST00000261789 A0A0G2JND7 137 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 DCTN3O75935 186 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 FAM155BO75949 473 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 MICAL2O94851 1124 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 ZWINTO95229 277 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 ATP2A2P16615 1042 aaKnown RBP17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 C15orf59Q2T9L4 293 aaPredicted RBP17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 ZNF667Q5HYK9 610 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 LBX2Q6XYB7 198 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 LONP2Q86WA8 852 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 BANPQ8N9N5 519 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 COPS5Q92905 334 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 SERAC1Q96JX3 654 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 DHRS4Q9BTZ2 278 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 C2orf71A6NGG8 1288 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 M0QYV0 167 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 KBTBD12Q3ZCT8 623 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 FAM102AQ5T9C2 384 aaPredicted RBP17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 TRNP1Q6NT89 227 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 DARS2Q6PI48 645 aaKnown RBP17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 C1orf228Q6PIY5 440 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 TTC13Q8NBP0 860 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 FAM13CQ8NE31 585 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 RAB3IPQ96QF0 476 aaPredicted RBP17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 LHX5Q9H2C1 402 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 ZFP69BQ9UJL9 534 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 EVPLQ92817 2033 aa17.11■□□□□ 0.33
TM9SF1-201ENST00000261789 TCRBV9S1A1TA0A576 114 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 EIF4E1BA6NMX2 242 aaKnown RBP17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 KBTBD13C9JR72 458 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 E7ESA3 106 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 APOC4-APOC2K7ER74 178 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 GPR25O00155 361 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 NOP56O00567 594 aaKnown RBP17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 TRUB2O95900 331 aaKnown RBP17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 APOC2P02655 101 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 PROZP22891 400 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 MXD4Q14582 209 aaPredicted RBP17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 TAZQ16635 292 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 FAXCQ5TGI0 409 aa17.1■□□□□ 0.33
TM9SF1-201ENST00000261789 TSHZ1Q6ZSZ6 1077 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms