RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 FEM1BQ9UK73 627 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 UNC13AQ9UPW8 1703 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 AGRPO00253 132 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 VCLP18206 1134 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 IREB2P48200 963 aaKnown RBP7.42□□□□□ -1.22
HERC2-201ENST00000261609 PSMC5P62195 406 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 CCNA1P78396 465 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 SPIDRQ14159 915 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 SEL1L3Q68CR1 1132 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 SERHL2Q9H4I8 314 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 SERHLQ9NQF3 203 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 ZSCAN32Q9NX65 697 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 ZNF608Q9ULD9 1512 aaPredicted RBP7.42□□□□□ -1.22
HERC2-201ENST00000261609 MYH9P35579 1960 aaKnown RBP7.42□□□□□ -1.22
HERC2-201ENST00000261609 SNX3O60493 162 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 CNOT3O75175 753 aaKnown RBP7.42□□□□□ -1.22
HERC2-201ENST00000261609 TPI1P60174 286 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 MTM1Q13496 603 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 SLC45A4Q5BKX6 768 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 UBE2Q1Q7Z7E8 422 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 FNIP1Q8TF40 1166 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 NLRP4Q96MN2 994 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 SP100P23497 879 aaPredicted RBP7.42□□□□□ -1.22
HERC2-201ENST00000261609 CNGA2Q16280 664 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 DUOXA2Q1HG44 320 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 TUBA3EQ6PEY2 450 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 OR6Y1Q8NGX8 325 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 APBB2Q92870 758 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 TATDN2Q93075 761 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 BDH2Q9BUT1 245 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 MRPL4Q9BYD3 311 aaKnown RBP7.42□□□□□ -1.22
HERC2-201ENST00000261609 MOSPD1Q9UJG1 213 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 PIK3R1P27986 724 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 PHKA2P46019 1235 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 PRKG1Q13976 671 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 DOK7Q18PE1 504 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 SLC10A5Q5PT55 438 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 SDE2Q6IQ49 451 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 C16orf62Q7Z3J2 963 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 ELMO2Q96JJ3 720 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 RBBP8Q99708 897 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 MTG1Q9BT17 334 aaPredicted RBP7.42□□□□□ -1.22
HERC2-201ENST00000261609 C2orf40Q9H1Z8 148 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 NMRK1Q9NWW6 199 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 AGO2Q9UKV8 859 aaKnown RBP7.42□□□□□ -1.22
HERC2-201ENST00000261609 ADGRL3Q9HAR2 1447 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 POLBP06746 335 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 NCOA4Q13772 614 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 B3GALT6Q96L58 329 aa7.42□□□□□ -1.22
HERC2-201ENST00000261609 ATXN2Q99700 1313 aaKnown RBP7.41□□□□□ -1.22
HERC2-201ENST00000261609 USP17L15C9J2P7 530 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 USP17L13C9JLJ4 530 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 USP17L11C9JVI0 530 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 USP17L18D6R9N7 530 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 USP17L22D6RA61 530 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 USP17L17D6RBQ6 530 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 USP17L19D6RCP7 530 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 USP17L20D6RJB6 530 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 YWHABP31946 246 aaKnown RBP7.41□□□□□ -1.22
HERC2-201ENST00000261609 USP17L24Q0WX57 530 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 MTFR1Q15390 333 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 PKN3Q6P5Z2 889 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 USP17L6PQ6QN14 398 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 THNSL1Q8IYQ7 743 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 VPS33BQ9H267 617 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 LRMDAQ9H2I8 198 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 TOPORSQ9NS56 1045 aaPredicted RBP7.41□□□□□ -1.22
HERC2-201ENST00000261609 MICAL3Q7RTP6 2002 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 EFCAB10A6NFE3 127 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 UNC5CO95185 931 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 NUP62P37198 522 aaPredicted RBP7.41□□□□□ -1.22
HERC2-201ENST00000261609 MMRN1Q13201 1228 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 C4orf22Q6V702 233 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 IKBIPQ70UQ0 350 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 FOXP4Q8IVH2 680 aaPredicted RBP7.41□□□□□ -1.22
HERC2-201ENST00000261609 RTKN2Q8IZC4 609 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 THEM5Q8N1Q8 247 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 OXNAD1Q96HP4 312 aaPredicted RBP7.41□□□□□ -1.22
HERC2-201ENST00000261609 TIPINQ9BVW5 301 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 VWA5AO00534 786 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 TM9SF1O15321 606 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 RIPK2O43353 540 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 PARNO95453 639 aaKnown RBP7.41□□□□□ -1.22
HERC2-201ENST00000261609 TMEM253P0C7T8 217 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 NME5P56597 212 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 TMC3Q7Z5M5 1100 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 NET1Q7Z628 596 aaPredicted RBP7.41□□□□□ -1.22
HERC2-201ENST00000261609 VPS33AQ96AX1 596 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 KCTD14Q9BQ13 255 aaPredicted RBP7.41□□□□□ -1.22
HERC2-201ENST00000261609 COPS7BQ9H9Q2 264 aaPredicted RBP7.41□□□□□ -1.22
HERC2-201ENST00000261609 ING4Q9UNL4 249 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 DFFAO00273 331 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 IMPDH2P12268 514 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 HSD17B4P51659 736 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 NME3Q13232 169 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 BLMHQ13867 455 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 ZSWIM7Q19AV6 140 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 RNF220Q5VTB9 566 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 CREG2Q8IUH2 290 aa7.41□□□□□ -1.22
HERC2-201ENST00000261609 PLEKHA8Q96JA3 519 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms