RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 PRMT1Q99873 361 aaKnown RBP11.32□□□□□ -0.6
URB2-201ENST00000258243 CINPQ9BW66 212 aaPredicted RBP11.32□□□□□ -0.6
URB2-201ENST00000258243 MTMR12Q9C0I1 747 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 IGFLR1Q9H665 355 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 TRIM45Q9H8W5 580 aaPredicted RBP11.32□□□□□ -0.6
URB2-201ENST00000258243 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.32□□□□□ -0.6
URB2-201ENST00000258243 NFKBIL1Q9UBC1 381 aaPredicted RBP11.32□□□□□ -0.6
URB2-201ENST00000258243 SFMBT1Q9UHJ3 866 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 DCTN4Q9UJW0 460 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 L1RE1Q9UN81 338 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 MROH7Q68CQ1 1323 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 CFAP69A5D8W1 941 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 CKBP12277 381 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 CNTN2Q02246 1040 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 PUDPQ08623 228 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 P3H1Q32P28 736 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 SNF8Q96H20 258 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 NAF1Q96HR8 494 aaKnown RBP11.32□□□□□ -0.6
URB2-201ENST00000258243 TRAIPQ9BWF2 469 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 RANBP17Q9H2T7 1088 aaKnown RBP11.32□□□□□ -0.6
URB2-201ENST00000258243 CYP4F11Q9HBI6 524 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 KLHL11Q9NVR0 708 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 CLCA2Q9UQC9 943 aa11.32□□□□□ -0.6
URB2-201ENST00000258243 CTDNEP1O95476 244 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 CHN1P15882 459 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 FBXW4P57775 412 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 PDK1Q15118 436 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 RBBP7Q16576 425 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 NFE2Q16621 373 aaPredicted RBP11.31□□□□□ -0.6
URB2-201ENST00000258243 METTL5Q9NRN9 209 aaKnown RBP11.31□□□□□ -0.6
URB2-201ENST00000258243 TMEM51Q9NW97 253 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 CAMTA1Q9Y6Y1 1673 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 LRRIQ3A6PVS8 624 aaPredicted RBP11.31□□□□□ -0.6
URB2-201ENST00000258243 FAM107AO95990 144 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 NCF2P19878 526 aaPredicted RBP11.31□□□□□ -0.6
URB2-201ENST00000258243 ACO1P21399 889 aaKnown RBP11.31□□□□□ -0.6
URB2-201ENST00000258243 LBRQ14739 615 aaKnown RBP11.31□□□□□ -0.6
URB2-201ENST00000258243 ANKS3Q6ZW76 656 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 ANO5Q75V66 913 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 SH3BP5LQ7L8J4 393 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 SPATA21Q7Z572 469 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 UBE2Q1Q7Z7E8 422 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 STX12Q86Y82 276 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 CATSPER1Q8NEC5 780 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 KRT35Q92764 455 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 CDK5RAP1Q96SZ6 601 aaKnown RBP11.31□□□□□ -0.6
URB2-201ENST00000258243 A1CFQ9NQ94 594 aaKnown RBP11.31□□□□□ -0.6
URB2-201ENST00000258243 GTSE1Q9NYZ3 720 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 CFAP99D6REC4 459 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 ZNF263O14978 683 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 GSNP06396 782 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 HIST1H2AGP0C0S8 130 aaPredicted RBP11.31□□□□□ -0.6
URB2-201ENST00000258243 HIST1H2ADP20671 130 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 POLD3Q15054 466 aaPredicted RBP11.31□□□□□ -0.6
URB2-201ENST00000258243 CCDC149Q6ZUS6 474 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 PPM1NQ8N819 430 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 HIST1H2AHQ96KK5 128 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 HIST1H2AJQ99878 128 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 H2AFJQ9BTM1 129 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 YIPF2Q9BWQ6 316 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 SNTG2Q9NY99 539 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 AIPL1Q9NZN9 384 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 FBXL21Q9UKT6 434 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 PHLPP1O60346 1717 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 TCP11X1B4DZS4 312 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 VDRP11473 427 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 PDIA2Q13087 525 aaKnown RBP11.31□□□□□ -0.6
URB2-201ENST00000258243 PTPAQ15257 358 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 HABP4Q5JVS0 413 aaKnown RBP11.31□□□□□ -0.6
URB2-201ENST00000258243 WDR49Q8IV35 697 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 LRRN4CLQ8ND94 238 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 XPO6Q96QU8 1125 aaKnown RBP11.31□□□□□ -0.6
URB2-201ENST00000258243 WDCPQ9H6R7 721 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 G3BP2Q9UN86 482 aaKnown RBP11.31□□□□□ -0.6
URB2-201ENST00000258243 MROH1Q8NDA8 1641 aa11.31□□□□□ -0.6
URB2-201ENST00000258243 SYNCRIPO60506 623 aaKnown RBP11.3□□□□□ -0.6
URB2-201ENST00000258243 TAL1P17542 331 aaPredicted RBP11.3□□□□□ -0.6
URB2-201ENST00000258243 NUP62P37198 522 aaPredicted RBP11.3□□□□□ -0.6
URB2-201ENST00000258243 SLC27A1Q6PCB7 646 aa11.3□□□□□ -0.6
URB2-201ENST00000258243 SRPK1Q96SB4 655 aaKnown RBP11.3□□□□□ -0.6
URB2-201ENST00000258243 MRPL40Q9NQ50 206 aaKnown RBP11.3□□□□□ -0.6
URB2-201ENST00000258243 GEMIN8Q9NWZ8 242 aaKnown RBP11.3□□□□□ -0.6
URB2-201ENST00000258243 MED1Q15648 1581 aaPredicted RBP11.3□□□□□ -0.6
URB2-201ENST00000258243 ETFBP38117 255 aa11.3□□□□□ -0.6
URB2-201ENST00000258243 HSPA9P38646 679 aaKnown RBP11.3□□□□□ -0.6
URB2-201ENST00000258243 ARSEP51690 589 aa11.3□□□□□ -0.6
URB2-201ENST00000258243 KPNA1P52294 538 aaPredicted RBP11.3□□□□□ -0.6
URB2-201ENST00000258243 AP1S2P56377 157 aa11.3□□□□□ -0.6
URB2-201ENST00000258243 ART3Q13508 389 aa11.3□□□□□ -0.6
URB2-201ENST00000258243 PPM1LQ5SGD2 360 aa11.3□□□□□ -0.6
URB2-201ENST00000258243 C1orf146Q5VVC0 180 aa11.3□□□□□ -0.6
URB2-201ENST00000258243 USP49Q70CQ1 688 aa11.3□□□□□ -0.6
URB2-201ENST00000258243 CRLF3Q8IUI8 442 aa11.3□□□□□ -0.6
URB2-201ENST00000258243 MMGT1Q8N4V1 131 aa11.3□□□□□ -0.6
URB2-201ENST00000258243 C1orf54Q8WWF1 131 aa11.3□□□□□ -0.6
URB2-201ENST00000258243 BHMTQ93088 406 aa11.3□□□□□ -0.6
URB2-201ENST00000258243 WDR18Q9BV38 432 aa11.3□□□□□ -0.6
URB2-201ENST00000258243 FANCEQ9HB96 536 aa11.3□□□□□ -0.6
URB2-201ENST00000258243 IL17RBQ9NRM6 502 aa11.3□□□□□ -0.6
URB2-201ENST00000258243 ITGA11Q9UKX5 1188 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms