RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 LCP1P13796 627 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 RABGGTBP53611 331 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 GUCY2DQ02846 1103 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 TRADDQ15628 312 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 ZFYVE27Q5T4F4 411 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 TMEM110Q86TL2 294 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 TMEM86AQ8N2M4 240 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 NIPA2Q8N8Q9 360 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 RNF25Q96BH1 459 aaPredicted RBP19.87■□□□□ 0.77
TRIM47-201ENST00000254816 SYT15Q9BQS2 421 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 MED10Q9BTT4 135 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 EPB41L5Q9HCM4 733 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 PSD3Q9NYI0 1048 aa19.87■□□□□ 0.77
TRIM47-201ENST00000254816 MKI67P46013 3256 aaKnown RBP19.87■□□□□ 0.77
TRIM47-201ENST00000254816 MYBPHLA2RUH7 354 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 PITPNM1O00562 1244 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 LHX1P48742 406 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 EPHB4P54760 987 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 HNRNPH2P55795 449 aaKnown RBP19.86■□□□□ 0.77
TRIM47-201ENST00000254816 RAB6CQ53S08 254 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 NOMO2Q5JPE7 1267 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 OLFML1Q6UWY5 402 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 PRELID2Q8N945 189 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 TSEN2Q8NCE0 465 aaKnown RBP19.86■□□□□ 0.77
TRIM47-201ENST00000254816 HEMGNQ9BXL5 484 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 DNAI2Q9GZS0 605 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 RAB6CQ9H0N0 254 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 GOLGA6L10A0A0M3HER8 536 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 INPPL1O15357 1258 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 LRCH4O75427 683 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 RARAP10276 462 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 ODC1P11926 461 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 FLT3P36888 993 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 CARSP49589 748 aaKnown RBP19.86■□□□□ 0.77
TRIM47-201ENST00000254816 GATMP50440 423 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 SIX1Q15475 284 aaPredicted RBP19.86■□□□□ 0.77
TRIM47-201ENST00000254816 TRIM60Q495X7 471 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 SH3PXD2AQ5TCZ1 1133 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 KATNAL2Q8IYT4 538 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 IFT81Q8WYA0 676 aa19.86■□□□□ 0.77
TRIM47-201ENST00000254816 HNRNPABQ99729 332 aaKnown RBP19.86■□□□□ 0.77
TRIM47-201ENST00000254816 TTI1O43156 1089 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 FAM163BP0C2L3 166 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 FAAP100Q0VG06 881 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 RXFP2Q8WXD0 754 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 RTP3Q9BQQ7 232 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 PLVAPQ9BX97 442 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 HIPK3Q9H422 1215 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 ZWILCHQ9H900 591 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 TBC1D13Q9NVG8 400 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 DNAJB4Q9UDY4 337 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 NFU1Q9UMS0 254 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.85■□□□□ 0.77
TRIM47-201ENST00000254816 RALAP11233 206 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 CAPN2P17655 700 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 SLC6A3Q01959 620 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 CLUL1Q15846 466 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 C15orf59Q2T9L4 293 aaPredicted RBP19.85■□□□□ 0.77
TRIM47-201ENST00000254816 SMTNL2Q2TAL5 461 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 URGCPQ8TCY9 931 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 FNIP1Q8TF40 1166 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 STK32AQ8WU08 396 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 RSPH1Q8WYR4 309 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 KHSRPQ92945 711 aaKnown RBP eCLIP19.85■□□□□ 0.77
TRIM47-201ENST00000254816 UROC1Q96N76 676 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 DUSP16Q9BY84 665 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 CRISPLD2Q9H0B8 497 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 TMEM161AQ9NX61 479 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 PCSK1NQ9UHG2 260 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 LCMT1Q9UIC8 334 aa19.85■□□□□ 0.77
TRIM47-201ENST00000254816 C2CD4BA6NLJ0 364 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 KRT1P04264 644 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 FAM153BP0C7A2 387 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 GPD1P21695 349 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 IL1R2P27930 398 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 CYP2C18P33260 490 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 TLE2Q04725 743 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 RNASELQ05823 741 aaKnown RBP19.84■□□□□ 0.77
TRIM47-201ENST00000254816 CDO1Q16878 200 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 FAM153CQ494X1 144 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 KCNT1Q5JUK3 1230 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 DCLRE1AQ6PJP8 1040 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 PIGZQ86VD9 579 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 IFT20Q8IY31 132 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 SEPT8Q92599 483 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 PCED1BQ96HM7 432 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 SLITRK6Q9H5Y7 841 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 FAM153AQ9UHL3 310 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 TTC3P53804 2025 aa19.84■□□□□ 0.77
TRIM47-201ENST00000254816 FSCN2O14926 492 aa19.83■□□□□ 0.77
TRIM47-201ENST00000254816 PHF2O75151 1096 aa19.83■□□□□ 0.77
TRIM47-201ENST00000254816 PDGFRAP16234 1089 aa19.83■□□□□ 0.77
TRIM47-201ENST00000254816 TNFRSF8P28908 595 aa19.83■□□□□ 0.77
TRIM47-201ENST00000254816 OR1G1P47890 313 aa19.83■□□□□ 0.77
TRIM47-201ENST00000254816 SLC25A11Q02978 314 aaKnown RBP19.83■□□□□ 0.77
TRIM47-201ENST00000254816 TTC27Q6P3X3 843 aa19.83■□□□□ 0.77
TRIM47-201ENST00000254816 ANKRD33Q7Z3H0 272 aa19.83■□□□□ 0.77
TRIM47-201ENST00000254816 DEFB128Q7Z7B8 93 aa19.83■□□□□ 0.77
TRIM47-201ENST00000254816 EXD1Q8NHP7 514 aa19.83■□□□□ 0.77
TRIM47-201ENST00000254816 CASKIN2Q8WXE0 1202 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms