RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 UBE2SQ16763 222 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 C4orf22Q6V702 233 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 TSPAN14Q8NG11 270 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 PGM2Q96G03 612 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 GCNAQ96QF7 691 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 DNAJC7Q99615 494 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 VWA5AO00534 786 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 GUCY1B2O75343 617 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 POLBP06746 335 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 GLI1P08151 1106 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 ITGA1P56199 1179 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 SNAP25P60880 206 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 ZNF699Q32M78 642 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 PERM1Q5SV97 790 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 OSCP1Q8WVF1 389 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 S100ZQ8WXG8 99 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 BDH2Q9BUT1 245 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 SELENONQ9NZV5 590 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 F5H423 210 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 CYP26A1O43174 497 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 KLHL18O94889 574 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 UNC5CO95185 931 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 PGM3O95394 542 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 QARSP47897 775 aaKnown RBP13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 EZH2Q15910 746 aaKnown RBP13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 EFHC2Q5JST6 749 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 FAM102AQ5T9C2 384 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 MIS18BP1Q6P0N0 1132 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 ZBTB33Q86T24 672 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 CCDC33Q8N5R6 958 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 ENGASEQ8NFI3 743 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 FAM20AQ96MK3 541 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 THUMPD3Q9BV44 507 aaKnown RBP13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 CHKBQ9Y259 395 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 TPRKBQ9Y3C4 175 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 GUCA1CO95843 209 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 GH2P01242 217 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 IL5RAQ01344 420 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 SLC5A9Q2M3M2 681 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 ATG14Q6ZNE5 492 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 TTC39CQ8N584 583 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 POC5Q8NA72 575 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 LINC00116Q8NCU8 138 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 MCPH1Q8NEM0 835 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 TPCN2Q8NHX9 752 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 TRPC4APQ8TEL6 797 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 AENQ8WTP8 325 aaKnown RBP13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 CENPTQ96BT3 561 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 PLEKHG4BQ96PX9 1271 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 TMEM47Q9BQJ4 181 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 ABT1Q9ULW3 272 aaKnown RBP13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 ATP8B3O60423 1300 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 HEATR9A2RTY3 570 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 PEX1O43933 1283 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 ZBTB7AO95365 584 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 SPDYAQ5MJ70 313 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 SEL1L3Q68CR1 1132 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 KRT74Q7RTS7 529 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 NOP9Q86U38 636 aaKnown RBP13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 LRRC49Q8IUZ0 686 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 HDHD2Q9H0R4 259 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 EHD4Q9H223 541 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 DNAJC16Q9Y2G8 782 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 CAPN6Q9Y6Q1 641 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 IQSEC2Q5JU85 1478 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 CBX6O95503 412 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 CSF1RP07333 972 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 HSMCR30P0CW71 290 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 MYBPC2Q14324 1141 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 SNX17Q15036 470 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 PDK3Q15120 406 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 TUBA3EQ6PEY2 450 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 OR6B3Q8NGW1 331 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 PTPRN2Q92932 1015 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 NLRP4Q96MN2 994 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 SERHL2Q9H4I8 314 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 SERHLQ9NQF3 203 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 ATP6V1HQ9UI12 483 aa13.63□□□□□ -0.23
PCDHGA3-201ENST00000253812 SPATA31D1Q6ZQQ2 1576 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 C3orf70A6NLC5 250 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 SNX3O60493 162 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 IL6P05231 212 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 RBP3P10745 1247 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 ZNF844Q08AG5 666 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 COX10Q12887 443 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 STOX1Q6ZVD7 989 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 AMER2Q8N7J2 671 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 GIMAP8Q8ND71 665 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 TMEM117Q9H0C3 514 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 LRMDAQ9H2I8 198 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 RFX7Q2KHR2 1363 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 PP2D1A8MPX8 630 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 PIGHQ14442 188 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 ALX1Q15699 326 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 TRIM65Q6PJ69 517 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 RBM44Q6ZP01 1051 aaKnown RBP13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 SETD9Q8NE22 299 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 VPS37AQ8NEZ2 397 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 C9orf16Q9BUW7 83 aa13.62□□□□□ -0.23
PCDHGA3-201ENST00000253812 MYLK2Q9H1R3 596 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms