RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 CXCL17Q6UXB2 119 aa13.35□□□□□ -0.27
SNAI1-201ENST00000244050 SCARA5Q6ZMJ2 495 aa13.35□□□□□ -0.27
SNAI1-201ENST00000244050 APBB1IPQ7Z5R6 666 aaPredicted RBP13.35□□□□□ -0.27
SNAI1-201ENST00000244050 TADA2BQ86TJ2 420 aa13.35□□□□□ -0.27
SNAI1-201ENST00000244050 C1orf127Q8N9H9 656 aa13.35□□□□□ -0.27
SNAI1-201ENST00000244050 ATXN2LQ8WWM7 1075 aaKnown RBP13.35□□□□□ -0.27
SNAI1-201ENST00000244050 CHMP6Q96FZ7 201 aa13.35□□□□□ -0.27
SNAI1-201ENST00000244050 ACAP3Q96P50 834 aa13.35□□□□□ -0.27
SNAI1-201ENST00000244050 FAM124BQ9H5Z6 455 aaPredicted RBP13.35□□□□□ -0.27
SNAI1-201ENST00000244050 XPNPEP3Q9NQH7 507 aa13.35□□□□□ -0.27
SNAI1-201ENST00000244050 NXF1Q9UBU9 619 aaKnown RBP13.35□□□□□ -0.27
SNAI1-201ENST00000244050 DDX20Q9UHI6 824 aaKnown RBP13.35□□□□□ -0.27
SNAI1-201ENST00000244050 SCN10AQ9Y5Y9 1956 aa13.35□□□□□ -0.27
SNAI1-201ENST00000244050 SMIM23A6NLE4 172 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 NDC80O14777 642 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 KIAA0754O94854 1291 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 NPTXRO95502 500 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 ACSL3O95573 720 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
SNAI1-201ENST00000244050 NFICP08651 508 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 KRT19P08727 400 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 KRT10P13645 584 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 PRKAR2AP13861 404 aaKnown RBP13.34□□□□□ -0.27
SNAI1-201ENST00000244050 DRD4P21917 467 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 ATP5DP30049 168 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 CCND3P30281 292 aaPredicted RBP13.34□□□□□ -0.27
SNAI1-201ENST00000244050 HOXC8P31273 242 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 BMP8BP34820 402 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 CDKN2BP42772 138 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 ZNF268Q14587 947 aaPredicted RBP13.34□□□□□ -0.27
SNAI1-201ENST00000244050 WDR72Q3MJ13 1102 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 PTPN20Q4JDL3 420 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 NOTUMQ6P988 496 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 SLC27A1Q6PCB7 646 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 C7orf61Q8IZ16 206 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 ZCCHC9Q8N567 271 aaKnown RBP13.34□□□□□ -0.27
SNAI1-201ENST00000244050 ALLCQ8N6M5 410 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 NKD2Q969F2 451 aaPredicted RBP13.34□□□□□ -0.27
SNAI1-201ENST00000244050 ZNF317Q96PQ6 595 aaPredicted RBP13.34□□□□□ -0.27
SNAI1-201ENST00000244050 SELENOSQ9BQE4 189 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 NINJ2Q9NZG7 142 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 DNPEPQ9ULA0 475 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 ZMYND8Q9ULU4 1186 aaPredicted RBP13.34□□□□□ -0.27
SNAI1-201ENST00000244050 PI4K2BG5E9Z4 385 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 DNALI1O14645 258 aaPredicted RBP13.34□□□□□ -0.27
SNAI1-201ENST00000244050 CILPO75339 1184 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 KRT7P08729 469 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 KRT3P12035 628 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 CD19P15391 556 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 HOXA11P31270 313 aaPredicted RBP13.34□□□□□ -0.27
SNAI1-201ENST00000244050 GRM5P41594 1212 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 SLCO1A2P46721 670 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 SLC20A2Q08357 652 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 SNX17Q15036 470 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 KYNUQ16719 465 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 NBPF20Q3BBV1 942 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 SLC10A6Q3KNW5 377 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 CYP4A22Q5TCH4 519 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 TAF2Q6P1X5 1199 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 GSTA5Q7RTV2 222 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 EXOC3L1Q86VI1 746 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 NME8Q8N427 588 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 OTUD6BQ8N6M0 293 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 SLC4A11Q8NBS3 891 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 FAM118BQ9BPY3 351 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 FRMD8P1Q9BZ68 369 aaPredicted RBP13.34□□□□□ -0.27
SNAI1-201ENST00000244050 TRIM6Q9C030 488 aaPredicted RBP13.34□□□□□ -0.27
SNAI1-201ENST00000244050 SDCBP2Q9H190 292 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 INTS9Q9NV88 658 aaKnown RBP13.34□□□□□ -0.27
SNAI1-201ENST00000244050 KLHL11Q9NVR0 708 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 CYTH4Q9UIA0 394 aa13.34□□□□□ -0.27
SNAI1-201ENST00000244050 A0A0C4DFX4 3053 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 C3orf70A6NLC5 250 aaPredicted RBP13.33□□□□□ -0.28
SNAI1-201ENST00000244050 ADAMTS4O75173 837 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 STAU1O95793 577 aaKnown RBP13.33□□□□□ -0.28
SNAI1-201ENST00000244050 ITGAVP06756 1048 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 ABHD2P08910 425 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 P4HA1P13674 534 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 ATF7P17544 494 aaPredicted RBP13.33□□□□□ -0.28
SNAI1-201ENST00000244050 PSMA2P25787 234 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 RFC1P35251 1148 aaPredicted RBP13.33□□□□□ -0.28
SNAI1-201ENST00000244050 GABRB2P47870 512 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 VPS41P49754 854 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 CRYBB1P53674 252 aaPredicted RBP13.33□□□□□ -0.28
SNAI1-201ENST00000244050 VCPP55072 806 aaKnown RBP13.33□□□□□ -0.28
SNAI1-201ENST00000244050 PTPN11Q06124 597 aaPredicted RBP13.33□□□□□ -0.28
SNAI1-201ENST00000244050 STAT4Q14765 748 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 TMEM132DQ14C87 1099 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 ACAP1Q15027 740 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 OASLQ15646 514 aaKnown RBP13.33□□□□□ -0.28
SNAI1-201ENST00000244050 TAZQ16635 292 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 QPCTQ16769 361 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 HADHQ16836 314 aaKnown RBP13.33□□□□□ -0.28
SNAI1-201ENST00000244050 LONRF1Q17RB8 773 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 FAM47CQ5HY64 1035 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 ZFYVE27Q5T4F4 411 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 KAZNQ674X7 775 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 TXNRD3NBQ6F5E7 133 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 CPLX4Q7Z7G2 160 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 TMEM40Q8WWA1 233 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms