RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ZWINTO95229 277 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 STIP1P31948 543 aaKnown RBP15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 RPL22P35268 128 aaKnown RBP15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 MAP3K10Q02779 954 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 TRABD2AQ86V40 505 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 ARHGAP24Q8N264 748 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 CDKL2Q92772 493 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 CNPY3Q9BT09 278 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 ELK3P41970 407 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 MTFR1Q15390 333 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 C15orf59Q2T9L4 293 aaPredicted RBP15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 TSNAXIP1Q2TAA8 658 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 FAM47CQ5HY64 1035 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 HEATR6Q6AI08 1181 aaKnown RBP15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 DPY19L2Q6NUT2 758 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 NPNTQ6UXI9 565 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 PIGWQ7Z7B1 504 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 C12orf42Q96LP6 360 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 CPXM1Q96SM3 734 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 TSPAN16Q9UKR8 245 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 A0A1W2PPM1 405 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 MAGEB2O15479 319 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 CIB2O75838 187 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 ADRA1DP25100 572 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 ICAM3P32942 547 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 MMRN1Q13201 1228 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 ZNF268Q14587 947 aaPredicted RBP15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 TAF11Q15544 211 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 MUM1Q2TAK8 710 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 LACTB2Q53H82 288 aaPredicted RBP15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 BEST2Q8NFU1 509 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 SPOCK2Q92563 424 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 ALKBH8Q96BT7 664 aaKnown RBP15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 PAK5Q9P286 719 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 TJP2Q9UDY2 1190 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 TRIM33Q9UPN9 1127 aa15.62■□□□□ 0.09
UBE2D4-201ENST00000222402 SOWAHBA6NEL2 793 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 GYG2O15488 501 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 CDKN2BP42772 138 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 CCDC14Q49A88 953 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 CELF3Q5SZQ8 465 aaKnown RBP15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 FAM182AQ5T1J6 154 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 C15orf39Q6ZRI6 1047 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 PDCD7Q8N8D1 485 aaKnown RBP15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 OLIG1Q8TAK6 271 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 TCP10LQ8TDR4 215 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 SREK1Q8WXA9 508 aaKnown RBP15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 PPARGC1AQ9UBK2 798 aaKnown RBP15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 EIF4E1BA6NMX2 242 aaKnown RBP15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 TRIM49D1C9J1S8 452 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 LRCH4O75427 683 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 ITGAVP06756 1048 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 ABHD2P08910 425 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 KCNA3P22001 575 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 SPRED3Q2MJR0 410 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 NLRP9Q7RTR0 991 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 ERO1BQ86YB8 467 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 ANKRD13AQ8IZ07 590 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 PRCCQ92733 491 aaPredicted RBP15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 HAPLN2Q9GZV7 340 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 MANSC1Q9H8J5 431 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 LRRC4Q9HBW1 653 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 RNF19AQ9NV58 838 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 E5RJQ4 531 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 ZNF286BP0CG31 522 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 MOB2Q70IA6 237 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 CCDC125Q86Z20 511 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 UNC45BQ8IWX7 931 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 FAM172AQ8WUF8 416 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 TMEM237Q96Q45 408 aa15.61■□□□□ 0.09
UBE2D4-201ENST00000222402 MSCO60682 206 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 CD48P09326 243 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 XRCC4Q13426 336 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 KIZQ2M2Z5 673 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 BBS12Q6ZW61 710 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 FASTKD5Q7L8L6 764 aaKnown RBP15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 TRIM42Q8IWZ5 723 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 LMNTD2Q8IXW0 634 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 AFG1LQ8WV93 481 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 ZBED3Q96IU2 234 aaPredicted RBP15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 ADAM7Q9H2U9 754 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 MARCOQ9UEW3 520 aaPredicted RBP15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 CPSF3Q9UKF6 684 aaKnown RBP15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 ACTL7BQ9Y614 415 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 CNTNAP2Q9UHC6 1331 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 APOC4-APOC2K7ER74 178 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 PIGRP01833 764 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 APOC2P02655 101 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 OGDHQ02218 1023 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 GHRHRQ02643 423 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 ENPEPQ07075 957 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 EFTUD2Q15029 972 aaKnown RBP eCLIP15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 BOLA3Q53S33 107 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 TTC39CQ8N584 583 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 NCAPGQ9BPX3 1015 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 PPP2R3BQ9Y5P8 575 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 EP400Q96L91 3159 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 KBTBD13C9JR72 458 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 ALOX15BO15296 676 aa15.6■□□□□ 0.09
UBE2D4-201ENST00000222402 CREB3O43889 395 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms