RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 NSUN2Q08J23 767 aaKnown RBP eCLIP4.57□□□□□ -1.68
CHD9-201ENST00000219084 EIF2B5Q13144 721 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 DMC1Q14565 340 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 VEPH1Q14D04 833 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 CHI3L2Q15782 390 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 SPANXN3Q5MJ09 141 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 TWF2Q6IBS0 349 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 STYK1Q6J9G0 422 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 ARCQ7LC44 396 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 WDR49Q8IV35 697 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 OSCP1Q8WVF1 389 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 KIF12Q96FN5 646 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 VPS50Q96JG6 964 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 SPATA16Q9BXB7 569 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 MRPS26Q9BYN8 205 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 PCMTD2Q9NV79 361 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 EIF3LQ9Y262 564 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 MEGF6O75095 1541 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 ZNF263O14978 683 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 CD3EAPO15446 510 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 NDUFS3O75489 264 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 ICAM1P05362 532 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 KCNA2P16389 499 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 YY1P25490 414 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 RAB15P59190 212 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 SLC34A1Q06495 639 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 MRNIPQ6NTE8 343 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 TTC30AQ86WT1 665 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 TTC30BQ8N4P2 665 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 KCNV2Q8TDN2 545 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 ACMSDQ8TDX5 336 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 VPS33AQ96AX1 596 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 CLMNQ96JQ2 1002 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 ASCC2Q9H1I8 757 aaPredicted RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 PAPOLBQ9NRJ5 636 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 ERAP1Q9NZ08 941 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 DLGAP2Q9P1A6 1054 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 ADAM28Q9UKQ2 775 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 RGPD1P0DJD0 1748 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 COL14A1Q05707 1796 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 TMEM114B3SHH9 223 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 DFFAO00273 331 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 BIRC5O15392 142 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 FAM58BPP0C7Q3 252 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 TRIM49P0CI25 452 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 TRIM49CP0CI26 452 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 FDPSP14324 419 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 CYP11B1P15538 503 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 GUCY1A2P33402 732 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 RFX5P48382 616 aaPredicted RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 FKBP1AP62942 108 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 MSLNQ13421 630 aaPredicted RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 XRCC4Q13426 336 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 LRRC14Q15048 493 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 TAB1Q15750 504 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 RRM2BQ7LG56 351 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 LDHDQ86WU2 507 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 ZNF483Q8TF39 744 aaPredicted RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 DPF2Q92785 391 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 ZNF333Q96JL9 665 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 C9orf16Q9BUW7 83 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 TMEM117Q9H0C3 514 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 RAD21L1Q9H4I0 556 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 ITGA11Q9UKX5 1188 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 CORO2BQ9UQ03 480 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 KIF13AQ9H1H9 1805 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 KIF13BQ9NQT8 1826 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 POLD2P49005 469 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 ST13P50502 369 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 GEMP55040 296 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 ERVK-24P63145 666 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 DDR1Q08345 913 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 TROAPQ12815 778 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 TOP3AQ13472 1001 aaPredicted RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 SWT1Q5T5J6 900 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 SWSAP1Q6NVH7 229 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 SH2D3CQ8N5H7 860 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 OR6P1Q8NGX9 317 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 TEKT4Q8WW24 435 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 PHF21AQ96BD5 680 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 PPP1R14BQ96C90 147 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 HINFPQ9BQA5 517 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 CCDC90BQ9GZT6 254 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 C20orf96Q9NUD7 363 aaPredicted RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 PRR23D1E9PI22 279 aaPredicted RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 H3BNX3 289 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 PRR23D2P0DMB1 279 aaPredicted RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 PDGFRAP16234 1089 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 PRDX5P30044 214 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 PIK3CGP48736 1102 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 CLK1P49759 484 aaKnown RBP4.57□□□□□ -1.68
CHD9-201ENST00000219084 STAT5BP51692 787 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 BCAT1P54687 386 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 PRKAA1Q13131 559 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 GTF2H3Q13889 308 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 COG2Q14746 738 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 HIPK4Q8NE63 616 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 C17orf80Q9BSJ5 609 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 APOL6Q9BWW8 343 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 FAM217BQ9NTX9 383 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms