RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 PKDCCQ504Y2 493 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 E4F1Q66K89 784 aaPredicted RBP13.92□□□□□ -0.18
TIMP1-201ENST00000218388 TMEM184AQ6ZMB5 413 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 TTC9BQ8N6N2 239 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 UBA3Q8TBC4 463 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 SLC20A1Q8WUM9 679 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 SECISBP2LQ93073 1101 aaKnown RBP13.92□□□□□ -0.18
TIMP1-201ENST00000218388 GUCD1Q96NT3 240 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 SMOQ99835 787 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 UBXN6Q9BZV1 441 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 MIS12Q9H081 205 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 CRISPLD1Q9H336 500 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 ASB3Q9Y575 518 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 SSU72P8A0A1W2PR75 194 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 NRDCO43847 1150 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 POU2F2P09086 479 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 CSH1P0DML2 217 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 CSH2P0DML3 217 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 SKILP12757 684 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 HOXB8P17481 243 aaPredicted RBP13.91□□□□□ -0.18
TIMP1-201ENST00000218388 SSTR3P32745 418 aaPredicted RBP13.91□□□□□ -0.18
TIMP1-201ENST00000218388 GTF2F1P35269 517 aaKnown RBP eCLIP13.91□□□□□ -0.18
TIMP1-201ENST00000218388 PLA2G4AP47712 749 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 ADAM15Q13444 863 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 KCNC3Q14003 757 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 DDR2Q16832 855 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 HGSNATQ68CP4 663 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 DENND1BQ6P3S1 775 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 DENND5BQ6ZUT9 1274 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 PASD1Q8IV76 773 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 IPO4Q8TEX9 1081 aaKnown RBP13.91□□□□□ -0.18
TIMP1-201ENST00000218388 STK32AQ8WU08 396 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 PABPC5Q96DU9 382 aaKnown RBP13.91□□□□□ -0.18
TIMP1-201ENST00000218388 HSFY1Q96LI6 401 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 ZNF512Q96ME7 567 aaPredicted RBP13.91□□□□□ -0.18
TIMP1-201ENST00000218388 KCNK16Q96T55 309 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.91□□□□□ -0.18
TIMP1-201ENST00000218388 LRRC4Q9HBW1 653 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 CYLDQ9NQC7 956 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 CLDND1Q9NY35 253 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 PATJQ8NI35 1801 aa13.91□□□□□ -0.18
TIMP1-201ENST00000218388 ABCB7O75027 752 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 SOAT2O75908 522 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 RTN3O95197 1032 aaPredicted RBP13.9□□□□□ -0.18
TIMP1-201ENST00000218388 PTMAP06454 111 aaKnown RBP13.9□□□□□ -0.18
TIMP1-201ENST00000218388 CHRNB2P17787 502 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 ATF6P18850 670 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 CDH5P33151 784 aaPredicted RBP13.9□□□□□ -0.18
TIMP1-201ENST00000218388 GPD2P43304 727 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 ACADSBP45954 432 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 NSFP46459 744 aaKnown RBP13.9□□□□□ -0.18
TIMP1-201ENST00000218388 ANKRD54Q6NXT1 300 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 CYP26C1Q6V0L0 522 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 EP400NLQ6ZTU2 488 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 ZNF571Q7Z3V5 609 aaPredicted RBP13.9□□□□□ -0.18
TIMP1-201ENST00000218388 PIGZQ86VD9 579 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 NUP93Q8N1F7 819 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 C1orf131Q8NDD1 294 aaKnown RBP13.9□□□□□ -0.18
TIMP1-201ENST00000218388 ZMIZ2Q8NF64 920 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 CMASQ8NFW8 434 aaPredicted RBP13.9□□□□□ -0.18
TIMP1-201ENST00000218388 SLC35F5Q8WV83 523 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 KCTD13Q8WZ19 329 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 CCDC42Q96M95 316 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 FBXO44Q9H4M3 255 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 SYNCQ9H7C4 482 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 PIDD1Q9HB75 910 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 ST7Q9NRC1 585 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 COMMD8Q9NX08 183 aa13.9□□□□□ -0.18
TIMP1-201ENST00000218388 UXTQ9UBK9 157 aaPredicted RBP13.9□□□□□ -0.18
TIMP1-201ENST00000218388 CCDC195A0A1B0GUA6 201 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 SLC38A8A6NNN8 435 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 CCL16O15467 120 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 LINC01565O15544 149 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 AKR1B10O60218 316 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 BEST1O76090 585 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 FGF19O95750 216 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 GLP2RO95838 553 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 CYP1A1P04798 512 aaPredicted RBP13.89□□□□□ -0.19
TIMP1-201ENST00000218388 EIF4A3P38919 411 aaKnown RBP13.89□□□□□ -0.19
TIMP1-201ENST00000218388 GPR15P49685 360 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 SLC5A3P53794 718 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 CACNA2D1P54289 1103 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 NOMO3P69849 1222 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 CCDC173Q0VFZ6 552 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 PDCLQ13371 301 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 COL19A1Q14993 1142 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 SKIV2LQ15477 1246 aaKnown RBP13.89□□□□□ -0.19
TIMP1-201ENST00000218388 CLEC16AQ2KHT3 1053 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 CTC1Q2NKJ3 1217 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 NAA35Q5VZE5 725 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 WDR59Q6PJI9 974 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 CCDC186Q7Z3E2 898 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 TMTC1Q8IUR5 882 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 SIX6OS1Q8N1H7 587 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 LEMD2Q8NC56 503 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 CCDC112Q8NEF3 446 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 VN1R2Q8NFZ6 395 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 GIPC2Q8TF65 315 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 PSMG2Q969U7 264 aa13.89□□□□□ -0.19
TIMP1-201ENST00000218388 PDLIM2Q96JY6 352 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms