RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 NIF3L1Q9GZT8 377 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 ZNF408Q9H9D4 720 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 SPDYE16A6NNV3 312 aaPredicted RBP15.78■□□□□ 0.12
EFNB1-201ENST00000204961 ATXN3P54252 364 aaPredicted RBP15.78■□□□□ 0.12
EFNB1-201ENST00000204961 PTP4A2Q12974 167 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 OLIG2Q13516 323 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 ANKRD20A2Q5SQ80 823 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 ANKRD20A1Q5TYW2 823 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 ANKRD20A3Q5VUR7 823 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 ENOSF1Q7L5Y1 443 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 CROCCP2Q86T23 111 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 VTI1AQ96AJ9 217 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 SERAC1Q96JX3 654 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 PCYT2Q99447 389 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 UNKQ9C0B0 810 aaKnown RBP15.78■□□□□ 0.12
EFNB1-201ENST00000204961 ELP3Q9H9T3 547 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 NRBP2Q9NSY0 501 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 PIM2Q9P1W9 311 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 BTBD7Q9P203 1132 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 GGA2Q9UJY4 613 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 FOCADQ5VW36 1801 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 CNTNAP2Q9UHC6 1331 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 TRIM49D1C9J1S8 452 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 COL11A2P13942 1736 aaPredicted RBP15.78■□□□□ 0.12
EFNB1-201ENST00000204961 TFE3P19532 575 aaPredicted RBP15.78■□□□□ 0.12
EFNB1-201ENST00000204961 KCNA3P22001 575 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 POLR2BP30876 1174 aaKnown RBP15.78■□□□□ 0.12
EFNB1-201ENST00000204961 MAN1A1P33908 653 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 ARL4CP56559 192 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 IL31Q6EBC2 164 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 DSTYKQ6XUX3 929 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 PPP1R14CQ8TAE6 165 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 SPATA33Q96N06 139 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 PCMTD2Q9NV79 361 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 ARL8BQ9NVJ2 186 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 PSMC3IPQ9P2W1 217 aaPredicted RBP15.78■□□□□ 0.12
EFNB1-201ENST00000204961 MEI4A8MW99 385 aa15.77■□□□□ 0.12
EFNB1-201ENST00000204961 MCF2LO15068 1137 aa15.77■□□□□ 0.12
EFNB1-201ENST00000204961 ALDH18A1P54886 795 aaKnown RBP15.77■□□□□ 0.12
EFNB1-201ENST00000204961 RNASEH2BQ5TBB1 312 aaKnown RBP15.77■□□□□ 0.12
EFNB1-201ENST00000204961 EFCAB12Q6NXP0 572 aa15.77■□□□□ 0.12
EFNB1-201ENST00000204961 C15orf39Q6ZRI6 1047 aa15.77■□□□□ 0.12
EFNB1-201ENST00000204961 C3orf20Q8ND61 904 aa15.77■□□□□ 0.12
EFNB1-201ENST00000204961 FAM13CQ8NE31 585 aa15.77■□□□□ 0.12
EFNB1-201ENST00000204961 SDCBP2Q9H190 292 aa15.77■□□□□ 0.12
EFNB1-201ENST00000204961 TMPRSS4Q9NRS4 437 aa15.77■□□□□ 0.12
EFNB1-201ENST00000204961 PPARGC1AQ9UBK2 798 aaKnown RBP15.77■□□□□ 0.12
EFNB1-201ENST00000204961 UNC5CO95185 931 aa15.77■□□□□ 0.11
EFNB1-201ENST00000204961 RXRBP28702 533 aa15.77■□□□□ 0.11
EFNB1-201ENST00000204961 PEX6Q13608 980 aa15.77■□□□□ 0.11
EFNB1-201ENST00000204961 FYB2Q5VWT5 728 aa15.77■□□□□ 0.11
EFNB1-201ENST00000204961 ACOT1Q86TX2 421 aa15.77■□□□□ 0.11
EFNB1-201ENST00000204961 USP6NLQ92738 828 aa15.77■□□□□ 0.11
EFNB1-201ENST00000204961 ST6GALNAC4Q9H4F1 302 aa15.77■□□□□ 0.11
EFNB1-201ENST00000204961 EVPLQ92817 2033 aa15.77■□□□□ 0.11
EFNB1-201ENST00000204961 A0A087WZ62 844 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 CXorf49A8MYA2 514 aaPredicted RBP15.76■□□□□ 0.11
EFNB1-201ENST00000204961 ADCY3O60266 1144 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 TOM1L1O75674 476 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 ASS1P00966 412 aaKnown RBP15.76■□□□□ 0.11
EFNB1-201ENST00000204961 GEMIN4P57678 1058 aaKnown RBP15.76■□□□□ 0.11
EFNB1-201ENST00000204961 HADHQ16836 314 aaKnown RBP15.76■□□□□ 0.11
EFNB1-201ENST00000204961 DALRD3Q5D0E6 543 aaKnown RBP15.76■□□□□ 0.11
EFNB1-201ENST00000204961 SLFN12LQ6IEE8 588 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 CDHR3Q6ZTQ4 885 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 NIPA1Q7RTP0 329 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 POLNQ7Z5Q5 900 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 ARID3BQ8IVW6 561 aaPredicted RBP15.76■□□□□ 0.11
EFNB1-201ENST00000204961 SHKBP1Q8TBC3 707 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 P3H4Q92791 437 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 CCDC124Q96CT7 223 aaKnown RBP15.76■□□□□ 0.11
EFNB1-201ENST00000204961 CLMNQ96JQ2 1002 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 FDXACB1Q9BRP7 624 aaPredicted RBP15.76■□□□□ 0.11
EFNB1-201ENST00000204961 CACNG4Q9UBN1 327 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 MFHAS1Q9Y4C4 1052 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 TTLL3Q9Y4R7 772 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 E5RJQ4 531 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 IQCF3P0C7M6 154 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 KDELR1P24390 212 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 RBL1P28749 1068 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 ADORA2BP29275 332 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 SESN2P58004 480 aaPredicted RBP15.76■□□□□ 0.11
EFNB1-201ENST00000204961 TMPRSS15P98073 1019 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 ZBTB8OSQ8IWT0 167 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 POU5F2Q8N7G0 328 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 AGBL3Q8NEM8 1001 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 FBXO27Q8NI29 283 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 RXFP2Q8WXD0 754 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 AGAP3Q96P47 875 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 WDR83Q9BRX9 315 aaKnown RBP15.76■□□□□ 0.11
EFNB1-201ENST00000204961 MRPL4Q9BYD3 311 aaKnown RBP15.76■□□□□ 0.11
EFNB1-201ENST00000204961 USP18Q9UMW8 372 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 USH1CQ9Y6N9 552 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.76■□□□□ 0.11
EFNB1-201ENST00000204961 NRXN2Q9P2S2 1712 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 HMGCRP04035 888 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 CALB1P05937 261 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 MYL2P10916 166 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 NAMPTP43490 491 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 YARSP54577 528 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms