RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Cxcl17Q5UW37 119 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 SkiQ60698 725 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Mcm7Q61881 719 aaKnown RBP9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 RadilQ69Z89 1099 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Zcchc2Q69ZB8 1166 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Fez2Q6TYB5 348 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 CyldQ80TQ2 952 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Epn1Q80VP1 575 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 WhrnQ80VW5 918 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Zbtb42Q811H0 420 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Maip1Q8BHE8 291 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Cox15Q8BJ03 413 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Ipo5Q8BKC5 1097 aaKnown RBP9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 FsbpQ8BKE5 299 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Ttc26Q8BS45 554 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Ddx19bQ8BZY3 494 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 MtrrQ8C1A3 696 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Pym1Q8CHP5 203 aaKnown RBP9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Cwf19l1Q8CI33 537 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Cdk17Q8K0D0 523 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Uap1Q91YN5 522 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 DarsQ922B2 501 aaKnown RBP9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Pdxdc1Q99K01 787 aaKnown RBP9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 MtapQ9CQ65 283 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 YwhabQ9CQV8 246 aaKnown RBP9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 RnmtQ9D0L8 465 aaKnown RBP9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 PgcQ9D7R7 392 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Eef1gQ9D8N0 437 aaKnown RBP9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 NapaQ9DB05 295 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Ca14Q9WVT6 337 aa9.18□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Slfn8B1ARD8 910 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Hnrnph3D3Z3N4 346 aaKnown RBP9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Rnf169E9Q7F2 694 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Olfr743L7N1Y2 311 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 PurbO35295 324 aaKnown RBP9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Kcnk4O88454 398 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 P01631 113 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Prl2c2P04095 224 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 C4bpaP08607 469 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 RaraP11416 462 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Id4P41139 161 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Psmc2P46471 433 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Abcd1P48410 736 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Polr3bP59470 1133 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Tbx3P70324 741 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Trim43cP86449 446 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Ebf1Q07802 591 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Slc2a13Q3UHK1 637 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Abi3bpQ59IW6 1179 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 UrgcpQ5NCI0 926 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Bdkrb1Q61125 334 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Ccdc57Q6PHN1 1016 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Zfp512bQ6PHP4 879 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Smg5Q6ZPY2 1017 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Rexo1Q7TT28 1213 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Nemp2Q8CB65 421 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Fam13bQ8K2H3 851 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 OtoaQ8K561 1137 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Ccdc12Q8R344 166 aaKnown RBP9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Uroc1Q8VC12 676 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Slc5a9Q8VDT1 685 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Sdcbp2Q99JZ0 292 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Haus2Q9CQS9 234 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 PigkQ9CXY9 395 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 MicalclQ9D5U9 680 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Ipo7Q9EPL8 1038 aaKnown RBP9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Wdr54Q9R0D8 334 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Notch4P31695 1964 aa9.17□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Zzef1Q5SSH7 2924 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 BC034090A0A087WP46 1202 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Gm13212B1ASQ7 799 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Vmn2r79E9Q067 851 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Vmn2r115E9Q0E7 857 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Vmn1r88E9Q235 316 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Mroh4G3X8W1 983 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Apol10bG3X9K7 334 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Kif3cO35066 796 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Ap1b1O35643 943 aaKnown RBP9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Per3O70361 1113 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Nkx2-5P42582 318 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Krt86P97861 486 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Fut7Q11131 389 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Tgfbrap1Q3UR70 860 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Kdm7aQ3UWM4 940 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Srbd1Q497V5 1015 aaKnown RBP9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Zfp235Q499D5 702 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 ADGRF3Q58Y75 991 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Islr2Q5RKR3 745 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Tsg101Q61187 391 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Krt14Q61781 484 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Sema4bQ62179 823 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Cd180Q62192 661 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Slc26a2Q62273 739 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Ncoa7Q6DFV7 943 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Hmgb4Q6P8W9 181 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Pabpc4Q6PHQ9 660 aaKnown RBP9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Rhbdf1Q6PIX5 856 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Ankrd24Q80VM7 985 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Prickle2Q80Y24 845 aa9.16□□□□□ -0.94
Pdlim5-209ENSMUST00000196908 Tmco3Q8BH01 678 aa9.16□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms