RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Lamp1P11438 406 aaKnown RBP20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 9130409I23RikQ3TS87 320 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Fam102aQ78T81 392 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Frmd4aQ8BIE6 1020 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Slc39a13Q8BZH0 361 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Kat14Q8CID0 779 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Kctd15Q8K0E1 283 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Thoc1Q8R3N6 657 aaKnown RBP20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Glis2Q8VDL9 521 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Rpa1Q8VEE4 623 aaKnown RBP20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Zfyve19Q9DAZ9 389 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Caln1Q9JJG7 219 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Limd1Q9QXD8 668 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Atp8b4A2ANX3 1194 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 GnazO70443 355 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Myl4P09541 193 aaKnown RBP20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Myl2P51667 166 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Clcn3P51791 818 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 StamP70297 548 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Ankmy2Q3TPE9 440 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Cfhr2Q4LDF6 332 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Prkaa1Q5EG47 559 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Rbl2Q64700 1135 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Tspan18Q80WR1 248 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Wasf2Q8BH43 497 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Sec63Q8VHE0 760 aaKnown RBP20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 YarsQ91WQ3 528 aaKnown RBP20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Cpt1bQ924X2 772 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Tlr9Q9EQU3 1032 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 PnkpQ9JLV6 522 aaKnown RBP20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Mbd1Q9Z2E2 636 aa20.62■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Dnase1l3O55070 310 aa20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Magea1O89006 320 aa20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Glb1P23780 647 aa20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Cxcr2P35343 359 aa20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 PctpP53808 214 aa20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Nrp1P97333 923 aa20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Gm14685Q52KH6 695 aa20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 PrkciQ62074 595 aaKnown RBP20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Sh3rf3Q8C120 878 aa20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Pomgnt1Q91X88 660 aa20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Slc39a3Q99K24 317 aa20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Dis3Q9CSH3 958 aaKnown RBP20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Bcs1lQ9CZP5 418 aa20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Tmem59Q9QY73 323 aa20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Magea2Q9R2A2 320 aa20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Kif9Q9WV04 790 aa20.61■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 D3Z070 196 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Gspt2Q149F3 632 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Mif4gdQ3UBZ5 222 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Samhd1Q60710 627 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Orc2Q60862 576 aaKnown RBP20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Spa17Q62252 149 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Nlrp4fQ66X05 959 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 2700097O09RikQ6PGK3 301 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Stk38lQ7TSE6 464 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 PlvapQ91VC4 438 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Hkdc1Q91W97 915 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Rmi1Q9D4G9 616 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Atp13a1Q9EPE9 1200 aaKnown RBP20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Gm29554A0A087WNW4 188 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Zfp612A0A1D5RMC2 672 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Acp4D3YTS9 425 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Vmn2r39L7N2E5 861 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Prom1O54990 867 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Elk3P41971 409 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 CttnQ60598 546 aaKnown RBP20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Ripor1Q68FE6 1223 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Gpatch2lQ6PE65 482 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Tas2r102Q7M717 329 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Crybg3Q80W49 1005 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Chmp2bQ8BJF9 213 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Stau2Q8CJ67 570 aaKnown RBP20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Vmn1r199Q8R280 367 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 CarfQ8VHI4 689 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 IrgqQ8VIM9 583 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Tceal1Q921P9 165 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Tmed5Q9CXE7 229 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Stk11Q9WTK7 436 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Krt16Q9Z2K1 469 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Cib2Q9Z309 187 aa20.6■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 PotegA5H0M4 473 aa20.59■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Ccdc13D3YV10 709 aa20.59■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Cops5O35864 334 aa20.59■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Srpk1O70551 648 aaKnown RBP20.59■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Hace1Q3U0D9 909 aa20.59■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Trim38Q5SZ99 471 aa20.59■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Synpo2Q91YE8 1087 aaKnown RBP20.59■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 CoprsQ9CQ13 173 aa20.59■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Vwa7Q9JHA8 891 aa20.59■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Capn15Q9JLG8 1095 aa20.59■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Pcsk1nQ9QXV0 258 aa20.59■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Dicer1Q8R418 1916 aa20.59■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Ankfn1A0A140LIW7 1083 aa20.58■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Gm3424L7N298 263 aa20.58■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Gm8246M0QWX9 263 aa20.58■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 AgxtO35423 414 aa20.58■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Rtn2O70622 471 aa20.58■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Hmgcs2P54869 508 aa20.58■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Q32P12 615 aa20.58■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms