RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A YPL261CQ08976 102 aa1.49□□□□□ -2.17
SFT1YKL006C-A YLR365WQ7LIF2 110 aa1.49□□□□□ -2.17
SFT1YKL006C-A UBR2Q07963 1872 aa1.48□□□□□ -2.17
SFT1YKL006C-A RPL36BO14455 100 aaKnown RBP1.48□□□□□ -2.17
SFT1YKL006C-A RPL36AP05745 100 aaPredicted RBP1.48□□□□□ -2.17
SFT1YKL006C-A YJL197C-AP0C5P0 93 aa1.48□□□□□ -2.17
SFT1YKL006C-A YGR164WP53291 111 aa1.48□□□□□ -2.17
SFT1YKL006C-A YMR103CQ04436 120 aa1.48□□□□□ -2.17
SFT1YKL006C-A OST5Q92316 86 aa1.48□□□□□ -2.17
SFT1YKL006C-A KRE5P22023 1365 aa1.47□□□□□ -2.17
SFT1YKL006C-A UBC5P15732 148 aa1.47□□□□□ -2.17
SFT1YKL006C-A PAU2P32612 120 aa1.47□□□□□ -2.17
SFT1YKL006C-A YBR090CP38253 122 aa1.47□□□□□ -2.17
SFT1YKL006C-A YHL037CP38733 133 aa1.47□□□□□ -2.17
SFT1YKL006C-A HPA2Q06592 156 aa1.47□□□□□ -2.17
SFT1YKL006C-A ZEO1Q08245 113 aa1.47□□□□□ -2.17
SFT1YKL006C-A YOR289WQ12012 251 aaPredicted RBP1.47□□□□□ -2.17
SFT1YKL006C-A DAD1Q12248 94 aa1.47□□□□□ -2.17
SFT1YKL006C-A LYS2P07702 1392 aa1.47□□□□□ -2.17
SFT1YKL006C-A BUD23P25627 275 aaPredicted RBP1.45□□□□□ -2.18
SFT1YKL006C-A PAU24P38155 120 aa1.45□□□□□ -2.18
SFT1YKL006C-A COA4Q05809 96 aa1.45□□□□□ -2.18
SFT1YKL006C-A PCC1Q3E833 88 aa1.45□□□□□ -2.18
SFT1YKL006C-A SKI3P17883 1432 aaKnown RBP1.45□□□□□ -2.18
SFT1YKL006C-A DNA2P38859 1522 aa1.45□□□□□ -2.18
SFT1YKL006C-A TY3B-IQ7LHG5 1498 aaKnown RBP1.44□□□□□ -2.18
SFT1YKL006C-A PFY1P07274 126 aa1.44□□□□□ -2.18
SFT1YKL006C-A SRX1P36077 127 aa1.44□□□□□ -2.18
SFT1YKL006C-A COX23P38824 151 aa1.44□□□□□ -2.18
SFT1YKL006C-A YIR020CP40575 100 aa1.44□□□□□ -2.18
SFT1YKL006C-A HUR1P45820 110 aa1.44□□□□□ -2.18
SFT1YKL006C-A RPL22BP56628 122 aaKnown RBP1.44□□□□□ -2.18
SFT1YKL006C-A YMR090WQ04304 227 aaKnown RBP1.44□□□□□ -2.18
SFT1YKL006C-A MIC10Q96VH5 97 aa1.44□□□□□ -2.18
SFT1YKL006C-A CDC39P25655 2108 aaKnown RBP1.43□□□□□ -2.18
SFT1YKL006C-A GEA1P47102 1408 aaPredicted RBP1.43□□□□□ -2.18
SFT1YKL006C-A PAU19P0CE85 124 aa1.43□□□□□ -2.18
SFT1YKL006C-A PAU3P25610 124 aa1.43□□□□□ -2.18
SFT1YKL006C-A GTT1P40582 234 aa1.43□□□□□ -2.18
SFT1YKL006C-A SNN1P48232 102 aa1.43□□□□□ -2.18
SFT1YKL006C-A REV3P14284 1504 aa1.42□□□□□ -2.18
SFT1YKL006C-A ACC1Q00955 2233 aaKnown RBP1.42□□□□□ -2.18
SFT1YKL006C-A UBC4P15731 148 aa1.42□□□□□ -2.18
SFT1YKL006C-A YRF1-3P0CX14 1859 aa1.41□□□□□ -2.18
SFT1YKL006C-A YRF1-7P0CX15 1859 aa1.41□□□□□ -2.18
SFT1YKL006C-A YRF1-6P53819 1859 aa1.41□□□□□ -2.18
SFT1YKL006C-A YSF3P0C074 85 aaPredicted RBP1.41□□□□□ -2.18
SFT1YKL006C-A YIL163CP40448 117 aa1.41□□□□□ -2.18
SFT1YKL006C-A POR2P40478 281 aa1.41□□□□□ -2.18
SFT1YKL006C-A VMA21P41806 77 aa1.41□□□□□ -2.18
SFT1YKL006C-A IRC21Q04772 201 aa1.41□□□□□ -2.18
SFT1YKL006C-A YOS1Q3E834 85 aa1.41□□□□□ -2.18
SFT1YKL006C-A GEA2P39993 1459 aaKnown RBP1.41□□□□□ -2.18
SFT1YKL006C-A RPL22AP05749 121 aaKnown RBP1.4□□□□□ -2.19
SFT1YKL006C-A HMRA2P0CY13 119 aa1.4□□□□□ -2.19
SFT1YKL006C-A YAR064WP39563 99 aa1.4□□□□□ -2.19
SFT1YKL006C-A CYB5P40312 120 aa1.4□□□□□ -2.19
SFT1YKL006C-A YNL122CP53921 115 aaPredicted RBP1.4□□□□□ -2.19
SFT1YKL006C-A SWC7Q06707 132 aa1.4□□□□□ -2.19
SFT1YKL006C-A YLR285C-AQ3E771 56 aa1.4□□□□□ -2.19
SFT1YKL006C-A YCL001W-BQ96VH2 84 aa1.4□□□□□ -2.19
SFT1YKL006C-A YOL013W-AP0C272 63 aaPredicted RBP1.39□□□□□ -2.19
SFT1YKL006C-A PAU16P35994 123 aa1.39□□□□□ -2.19
SFT1YKL006C-A PAU15P40585 124 aa1.39□□□□□ -2.19
SFT1YKL006C-A CCW12Q12127 133 aa1.39□□□□□ -2.19
SFT1YKL006C-A KSH1Q8TGJ3 72 aa1.39□□□□□ -2.19
SFT1YKL006C-A CAT8P39113 1433 aa1.39□□□□□ -2.19
SFT1YKL006C-A TY4B-JP47024 1803 aa1.38□□□□□ -2.19
SFT1YKL006C-A YBR013CP38215 129 aa1.38□□□□□ -2.19
SFT1YKL006C-A COA6Q3E846 104 aa1.38□□□□□ -2.19
SFT1YKL006C-A ENV10Q99382 181 aa1.38□□□□□ -2.19
SFT1YKL006C-A YLR419WQ06698 1435 aaKnown RBP1.38□□□□□ -2.19
SFT1YKL006C-A YCR001WP25347 104 aa1.37□□□□□ -2.19
SFT1YKL006C-A YJL009WP47078 108 aa1.37□□□□□ -2.19
SFT1YKL006C-A MIC27P50945 234 aa1.37□□□□□ -2.19
SFT1YKL006C-A YLR363W-AQ3E747 85 aa1.37□□□□□ -2.19
SFT1YKL006C-A ROM2P51862 1356 aaKnown RBP1.36□□□□□ -2.19
SFT1YKL006C-A RPA190P10964 1664 aaKnown RBP1.36□□□□□ -2.19
SFT1YKL006C-A SLH1P53327 1967 aaKnown RBP1.36□□□□□ -2.19
SFT1YKL006C-A RSM19P53733 91 aaPredicted RBP1.36□□□□□ -2.19
SFT1YKL006C-A MIX14Q04341 121 aa1.36□□□□□ -2.19
SFT1YKL006C-A PDR10P51533 1564 aa1.35□□□□□ -2.19
SFT1YKL006C-A YOR072WQ08486 104 aa1.35□□□□□ -2.19
SFT1YKL006C-A FIT3Q08907 204 aa1.35□□□□□ -2.19
SFT1YKL006C-A YHR138CP38841 114 aaPredicted RBP1.34□□□□□ -2.19
SFT1YKL006C-A YIL102CP40488 101 aa1.34□□□□□ -2.19
SFT1YKL006C-A VPS55P47111 140 aa1.34□□□□□ -2.19
SFT1YKL006C-A MGR2Q02889 113 aa1.34□□□□□ -2.19
SFT1YKL006C-A YMR321CQ04898 105 aa1.34□□□□□ -2.19
SFT1YKL006C-A LSM6Q06406 86 aaKnown RBP1.34□□□□□ -2.19
SFT1YKL006C-A YGL041C-BQ3E750 60 aa1.34□□□□□ -2.19
SFT1YKL006C-A YCR075W-AQ3E830 75 aa1.34□□□□□ -2.19
SFT1YKL006C-A YPK9Q12697 1472 aa1.34□□□□□ -2.19
SFT1YKL006C-A SSN2P38931 1420 aa1.33□□□□□ -2.2
SFT1YKL006C-A RPS22AP0C0W1 130 aaKnown RBP1.33□□□□□ -2.2
SFT1YKL006C-A EMC5P40540 141 aa1.33□□□□□ -2.2
SFT1YKL006C-A ICS3P47034 131 aa1.33□□□□□ -2.2
SFT1YKL006C-A MRPS12P53732 153 aa1.33□□□□□ -2.2
SFT1YKL006C-A LCL2Q08045 131 aa1.33□□□□□ -2.2
SFT1YKL006C-A YGR240C-AQ3E786 66 aa1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms