RNA–Protein interactions for RNA: YDR525W

API2, Transcript of Dubious open reading frame, yeast

Gene API2, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
API2	YDR525W	RPS8A	P0CX39	200 aa	Known RBP	3.04	□□□□□ -1.92
API2	YDR525W	RPS8B	P0CX40	200 aa	Known RBP	3.04	□□□□□ -1.92
API2	YDR525W	CUP2	P15315	225 aa		3.04	□□□□□ -1.92
API2	YDR525W	YCR043C	P25361	127 aa		3.04	□□□□□ -1.92
API2	YDR525W	RPL16B	P26785	198 aa	Known RBP	3.04	□□□□□ -1.92
API2	YDR525W	YBR013C	P38215	129 aa		3.04	□□□□□ -1.92
API2	YDR525W	YDR366C	P87287	132 aa		3.04	□□□□□ -1.92
API2	YDR525W	APS2	Q00381	147 aa		3.04	□□□□□ -1.92
API2	YDR525W	UPS3	Q04006	179 aa		3.04	□□□□□ -1.92
API2	YDR525W	YGL010W	P25338	174 aa		3.03	□□□□□ -1.92
API2	YDR525W	YCR001W	P25347	104 aa		3.03	□□□□□ -1.92
API2	YDR525W	PAM17	P36147	197 aa		3.03	□□□□□ -1.92
API2	YDR525W	RPB11	P38902	120 aa		3.03	□□□□□ -1.92
API2	YDR525W	PAU5	P43575	122 aa		3.03	□□□□□ -1.92
API2	YDR525W	YPS5	P53057	165 aa		3.03	□□□□□ -1.92
API2	YDR525W	SNU23	Q12368	194 aa	Predicted RBP	3.03	□□□□□ -1.92
API2	YDR525W	Q0255	P03881	472 aa		3.02	□□□□□ -1.93
API2	YDR525W	YCR023C	P25351	611 aa		3.02	□□□□□ -1.93
API2	YDR525W	YCH1	P42937	148 aa		3.02	□□□□□ -1.93
API2	YDR525W	AIM34	Q03673	198 aa		3.02	□□□□□ -1.93
API2	YDR525W	YNR034W-A	Q3E841	98 aa		3.02	□□□□□ -1.93
API2	YDR525W	KRE9	P39005	276 aa		3.01	□□□□□ -1.93
API2	YDR525W	NSE4	P43124	402 aa		3.01	□□□□□ -1.93
API2	YDR525W	KEG1	P43614	200 aa		3.01	□□□□□ -1.93
API2	YDR525W	GPI19	Q04082	140 aa		3.01	□□□□□ -1.93
API2	YDR525W	YLR112W	Q12130	139 aa		3.01	□□□□□ -1.93
API2	YDR525W	PAU19	P0CE85	124 aa		3	□□□□□ -1.93
API2	YDR525W	PAU21	P0CE86	164 aa		3	□□□□□ -1.93
API2	YDR525W	PAU22	P0CE87	164 aa		3	□□□□□ -1.93
API2	YDR525W	RPL42A	P0CX27	106 aa	Known RBP	3	□□□□□ -1.93
API2	YDR525W	RPL42B	P0CX28	106 aa	Known RBP	3	□□□□□ -1.93
API2	YDR525W	PAU3	P25610	124 aa		3	□□□□□ -1.93
API2	YDR525W	ZRT1	P32804	376 aa		3	□□□□□ -1.93
API2	YDR525W	YKR032W	P36127	104 aa		3	□□□□□ -1.93
API2	YDR525W	YHR140W	P38842	239 aa		3	□□□□□ -1.93
API2	YDR525W	PAU7	P39545	55 aa		3	□□□□□ -1.93
API2	YDR525W	YGR017W	P53210	297 aa		3	□□□□□ -1.93
API2	YDR525W	DIA1	P54005	336 aa		3	□□□□□ -1.93
API2	YDR525W	HAL1	Q01766	294 aa		3	□□□□□ -1.93
API2	YDR525W	SGF11	Q03067	99 aa		3	□□□□□ -1.93
API2	YDR525W	YLR042C	Q07990	161 aa		3	□□□□□ -1.93
API2	YDR525W	YCR024C-B	Q3E7Z8	88 aa		3	□□□□□ -1.93
API2	YDR525W	YBR126W-A	Q8TGU7	68 aa		3	□□□□□ -1.93
API2	YDR525W	POR1	P04840	283 aa	Known RBP	2.99	□□□□□ -1.93
API2	YDR525W	RPL27A	P0C2H6	136 aa	Known RBP	2.99	□□□□□ -1.93
API2	YDR525W	DAD2	P36162	133 aa		2.99	□□□□□ -1.93
API2	YDR525W	MRPL28	P36527	147 aa		2.99	□□□□□ -1.93
API2	YDR525W	PET8	P38921	284 aa		2.99	□□□□□ -1.93
API2	YDR525W	YNL217W	P40152	326 aa		2.99	□□□□□ -1.93
API2	YDR525W	GTT1	P40582	234 aa		2.99	□□□□□ -1.93
API2	YDR525W	SDS23	P53172	527 aa		2.99	□□□□□ -1.93
API2	YDR525W	THG1	P53215	237 aa	Known RBP	2.99	□□□□□ -1.93
API2	YDR525W	GTO3	Q04806	366 aa		2.99	□□□□□ -1.93
API2	YDR525W	CSM4	Q08955	156 aa		2.99	□□□□□ -1.93
API2	YDR525W	FSF1	Q12029	327 aa	Known RBP	2.99	□□□□□ -1.93
API2	YDR525W	YGR240C-A	Q3E786	66 aa		2.99	□□□□□ -1.93
API2	YDR525W	SEC4	P07560	215 aa	Known RBP	2.98	□□□□□ -1.93
API2	YDR525W	RPL23A	P0CX41	137 aa	Known RBP	2.98	□□□□□ -1.93
API2	YDR525W	RPL23B	P0CX42	137 aa	Known RBP	2.98	□□□□□ -1.93
API2	YDR525W	UBC5	P15732	148 aa		2.98	□□□□□ -1.93
API2	YDR525W	YGR149W	P48236	432 aa		2.98	□□□□□ -1.93
API2	YDR525W	DXO1	Q06349	442 aa		2.98	□□□□□ -1.93
API2	YDR525W	RPS22B	Q3E7Y3	130 aa	Known RBP	2.98	□□□□□ -1.93
API2	YDR525W	YCR075W-A	Q3E830	75 aa		2.98	□□□□□ -1.93
API2	YDR525W	SUR2	P38992	349 aa		2.97	□□□□□ -1.93
API2	YDR525W	MGR2	Q02889	113 aa		2.97	□□□□□ -1.93
API2	YDR525W	DGA1	Q08650	418 aa		2.97	□□□□□ -1.93
API2	YDR525W	POM33	Q12164	279 aa		2.97	□□□□□ -1.93
API2	YDR525W	IRC22	P40006	225 aa		2.96	□□□□□ -1.94
API2	YDR525W	RPR2	P40571	144 aa		2.96	□□□□□ -1.94
API2	YDR525W	CDC40	P40968	455 aa	Predicted RBP	2.96	□□□□□ -1.94
API2	YDR525W	CYT2	Q00873	224 aa		2.96	□□□□□ -1.94
API2	YDR525W	YML108W	Q03759	105 aa		2.96	□□□□□ -1.94
API2	YDR525W	ZEO1	Q08245	113 aa		2.96	□□□□□ -1.94
API2	YDR525W	YLL066W-B	Q8TGJ7	56 aa		2.96	□□□□□ -1.94
API2	YDR525W	KTI12	P34253	313 aa	Known RBP	2.95	□□□□□ -1.94
API2	YDR525W	YER076C	P40049	302 aa		2.95	□□□□□ -1.94
API2	YDR525W	TVP18	Q04767	167 aa		2.95	□□□□□ -1.94
API2	YDR525W	SAL1	D6W196	494 aa		2.94	□□□□□ -1.94
API2	YDR525W	PFY1	P07274	126 aa		2.94	□□□□□ -1.94
API2	YDR525W	MRP49	P32388	137 aa		2.94	□□□□□ -1.94
API2	YDR525W	YNL200C	P40165	246 aa	Known RBP	2.94	□□□□□ -1.94
API2	YDR525W	TIM11	P81449	96 aa	Predicted RBP	2.94	□□□□□ -1.94
API2	YDR525W	YIL014C-A	Q02598	104 aa		2.94	□□□□□ -1.94
API2	YDR525W	FCF1	Q05498	189 aa	Predicted RBP	2.94	□□□□□ -1.94
API2	YDR525W	DPP1	Q05521	289 aa		2.94	□□□□□ -1.94
API2	YDR525W	RPL33A	P05744	107 aa	Known RBP	2.93	□□□□□ -1.94
API2	YDR525W	PRE1	P22141	198 aa	Known RBP	2.93	□□□□□ -1.94
API2	YDR525W	RPL16A	P26784	199 aa	Known RBP	2.93	□□□□□ -1.94
API2	YDR525W	GSP1	P32835	219 aa	Known RBP	2.93	□□□□□ -1.94
API2	YDR525W	GSP2	P32836	220 aa	Known RBP	2.93	□□□□□ -1.94
API2	YDR525W	TEM1	P38987	245 aa		2.93	□□□□□ -1.94
API2	YDR525W	UIP3	P39547	235 aa		2.93	□□□□□ -1.94
API2	YDR525W	RPL33B	P41056	107 aa	Known RBP	2.93	□□□□□ -1.94
API2	YDR525W	DCV1	P43595	202 aa		2.93	□□□□□ -1.94
API2	YDR525W	TOS6	P48560	102 aa		2.93	□□□□□ -1.94
API2	YDR525W	YMR122W-A	Q3E842	84 aa		2.93	□□□□□ -1.94
API2	YDR525W	YKR070W	P36151	352 aa	Known RBP	2.92	□□□□□ -1.94
API2	YDR525W	SPC1	P46965	94 aa		2.92	□□□□□ -1.94
API2	YDR525W	YJR146W	P47174	117 aa		2.92	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms