RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 WDR44Q5JSH3 913 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 IER5LQ5T953 404 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 BMP8AQ7Z5Y6 402 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 FAM35AQ86V20 835 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 UNC93AQ86WB7 457 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 TRIM59Q8IWR1 403 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 CRYBG2Q8N1P7 616 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 C12orf29Q8N999 325 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 WHAMMQ8TF30 809 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 ELSPBP1Q96BH3 223 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 RSPRY1Q96DX4 576 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 GCNAQ96QF7 691 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 GPR88Q9GZN0 384 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 ZFP14Q9HCL3 533 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 FAM49BQ9NUQ9 324 aa18.42■□□□□ 0.54
PHGDH-227ENST00000641811 PTPRDP23468 1912 aa18.41■□□□□ 0.54
PHGDH-227ENST00000641811 USP46P62068 366 aa18.41■□□□□ 0.54
PHGDH-227ENST00000641811 LRMPQ12912 555 aa18.41■□□□□ 0.54
PHGDH-227ENST00000641811 ARHGAP15Q53QZ3 475 aa18.41■□□□□ 0.54
PHGDH-227ENST00000641811 VITQ6UXI7 678 aa18.41■□□□□ 0.54
PHGDH-227ENST00000641811 ARID3BQ8IVW6 561 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-227ENST00000641811 FUKQ8N0W3 1084 aa18.41■□□□□ 0.54
PHGDH-227ENST00000641811 SIX5Q8N196 739 aa18.41■□□□□ 0.54
PHGDH-227ENST00000641811 TRMT2BQ96GJ1 504 aaKnown RBP18.41■□□□□ 0.54
PHGDH-227ENST00000641811 SPATA17Q96L03 361 aa18.41■□□□□ 0.54
PHGDH-227ENST00000641811 KCNK16Q96T55 309 aa18.41■□□□□ 0.54
PHGDH-227ENST00000641811 SLC46A2Q9BY10 475 aa18.41■□□□□ 0.54
PHGDH-227ENST00000641811 ELOVL4Q9GZR5 314 aa18.41■□□□□ 0.54
PHGDH-227ENST00000641811 TASP1Q9H6P5 420 aa18.41■□□□□ 0.54
PHGDH-227ENST00000641811 TRPV4Q9HBA0 871 aa18.41■□□□□ 0.54
PHGDH-227ENST00000641811 SLC2A4RGQ9NR83 387 aa18.41■□□□□ 0.54
PHGDH-227ENST00000641811 CA14Q9ULX7 337 aa18.41■□□□□ 0.54
PHGDH-227ENST00000641811 KRBA1A5PL33 1030 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 TRIM66O15016 1216 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 CILPO75339 1184 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 TADA3O75528 432 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 PRAMEF12O95522 483 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 GNA14O95837 355 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 COL9A1P20849 921 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 ANXA13P27216 316 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 MARSP56192 900 aaKnown RBP18.4■□□□□ 0.54
PHGDH-227ENST00000641811 ZNF394Q53GI3 561 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 TXNDC8Q6A555 127 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 FBXL6Q8N531 539 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 SLC2A14Q8TDB8 520 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 C8orf48Q96LL4 319 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 MYRFLQ96LU7 910 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 NT5C1AQ9BXI3 368 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 SMG9Q9H0W8 520 aaKnown RBP18.4■□□□□ 0.54
PHGDH-227ENST00000641811 CISHQ9NSE2 258 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 WNT16Q9UBV4 365 aa18.4■□□□□ 0.54
PHGDH-227ENST00000641811 HEPACAM2A8MVW5 462 aa18.39■□□□□ 0.53
PHGDH-227ENST00000641811 ADORA2BP29275 332 aa18.39■□□□□ 0.53
PHGDH-227ENST00000641811 KCNH2Q12809 1159 aa18.39■□□□□ 0.53
PHGDH-227ENST00000641811 DENND5BQ6ZUT9 1274 aa18.39■□□□□ 0.53
PHGDH-227ENST00000641811 IRF2BP1Q8IU81 584 aa18.39■□□□□ 0.53
PHGDH-227ENST00000641811 CREBRFQ8IUR6 639 aa18.39■□□□□ 0.53
PHGDH-227ENST00000641811 MAB21L3Q8N8X9 362 aa18.39■□□□□ 0.53
PHGDH-227ENST00000641811 LRRC3BQ96PB8 259 aa18.39■□□□□ 0.53
PHGDH-227ENST00000641811 KRT82Q9NSB4 513 aa18.39■□□□□ 0.53
PHGDH-227ENST00000641811 UXTQ9UBK9 157 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-227ENST00000641811 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.39■□□□□ 0.53
PHGDH-227ENST00000641811 ATP8B3O60423 1300 aa18.39■□□□□ 0.53
PHGDH-227ENST00000641811 AP1G2O75843 785 aa18.38■□□□□ 0.53
PHGDH-227ENST00000641811 BEST1O76090 585 aa18.38■□□□□ 0.53
PHGDH-227ENST00000641811 FGFR1OPO95684 399 aaKnown RBP18.38■□□□□ 0.53
PHGDH-227ENST00000641811 CCDC192P0DO97 292 aa18.38■□□□□ 0.53
PHGDH-227ENST00000641811 NPR3P17342 541 aa18.38■□□□□ 0.53
PHGDH-227ENST00000641811 VCPP55072 806 aaKnown RBP18.38■□□□□ 0.53
PHGDH-227ENST00000641811 IFRD2Q12894 506 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-227ENST00000641811 CUL2Q13617 745 aa18.38■□□□□ 0.53
PHGDH-227ENST00000641811 FLCNQ8NFG4 579 aa18.38■□□□□ 0.53
PHGDH-227ENST00000641811 LMO3Q8TAP4 145 aa18.38■□□□□ 0.53
PHGDH-227ENST00000641811 MRPS31Q92665 395 aaKnown RBP18.38■□□□□ 0.53
PHGDH-227ENST00000641811 CNOT6LQ96LI5 555 aaKnown RBP18.38■□□□□ 0.53
PHGDH-227ENST00000641811 SMOQ99835 787 aa18.38■□□□□ 0.53
PHGDH-227ENST00000641811 TRMT61BQ9BVS5 477 aaKnown RBP18.38■□□□□ 0.53
PHGDH-227ENST00000641811 MFSD1Q9H3U5 465 aa18.38■□□□□ 0.53
PHGDH-227ENST00000641811 PMM2O15305 246 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 AFPP02771 609 aaKnown RBP18.37■□□□□ 0.53
PHGDH-227ENST00000641811 RAD23BP54727 409 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 TPD52L1Q16890 204 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-227ENST00000641811 MON1AQ86VX9 555 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 MFSD6LQ8IWD5 586 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 SUGP1Q8IWZ8 645 aaKnown RBP18.37■□□□□ 0.53
PHGDH-227ENST00000641811 CMTM8Q8IZV2 173 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 SLC4A11Q8NBS3 891 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 ZMIZ2Q8NF64 920 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 CYFIP2Q96F07 1278 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 SMARCD1Q96GM5 515 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 FAXDC2Q96IV6 333 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 CEP295NLQ96MC4 621 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 HEXIM2Q96MH2 286 aaKnown RBP18.37■□□□□ 0.53
PHGDH-227ENST00000641811 SLC22A12Q96S37 553 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 CYP2S1Q96SQ9 504 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 HNRNPABQ99729 332 aaKnown RBP18.37■□□□□ 0.53
PHGDH-227ENST00000641811 TTLL2Q9BWV7 592 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 TRPC7Q9HCX4 862 aa18.37■□□□□ 0.53
PHGDH-227ENST00000641811 DMAP1Q9NPF5 467 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-227ENST00000641811 COL4A3Q01955 1670 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms