RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 TOR4AQ9NXH8 423 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 ABI2Q9NYB9 513 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-212ENST00000641247 UBQLN1Q9UMX0 589 aaKnown RBP10.48□□□□□ -0.73
PHGDH-212ENST00000641247 KIAA1024Q9UPX6 916 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 STK36Q9NRP7 1315 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 THADAQ6YHU6 1953 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 A0A087WV48 116 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 C2orf78A6NCI8 922 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 TRABD2BA6NFA1 517 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 SCAMP3O14828 347 aaKnown RBP10.47□□□□□ -0.73
PHGDH-212ENST00000641247 FAM189A1O60320 539 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 ADRB2P07550 413 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 PDIA4P13667 645 aaKnown RBP10.47□□□□□ -0.73
PHGDH-212ENST00000641247 ITPKBP27987 946 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 FOSBP53539 338 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 MRPS21P82921 87 aaKnown RBP10.47□□□□□ -0.73
PHGDH-212ENST00000641247 HMGN5P82970 282 aaKnown RBP10.47□□□□□ -0.73
PHGDH-212ENST00000641247 ZNF33AQ06730 810 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 CAMK2BQ13554 666 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 NOLC1Q14978 699 aaKnown RBP eCLIP10.47□□□□□ -0.73
PHGDH-212ENST00000641247 ENOX2Q16206 610 aaKnown RBP10.47□□□□□ -0.73
PHGDH-212ENST00000641247 DDR2Q16832 855 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 SPDYCQ5MJ68 293 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 SPATA1Q5VX52 437 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 WSCD1Q658N2 575 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 CPLX2Q6PUV4 134 aaKnown RBP10.47□□□□□ -0.73
PHGDH-212ENST00000641247 TMPRSS7Q7RTY8 843 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 ADGRG2Q8IZP9 1017 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 NSUN7Q8NE18 718 aaKnown RBP10.47□□□□□ -0.73
PHGDH-212ENST00000641247 SH3RF2Q8TEC5 729 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 WHAMMQ8TF30 809 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 MRPS31Q92665 395 aaKnown RBP10.47□□□□□ -0.73
PHGDH-212ENST00000641247 ATP2A3Q93084 1043 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 NTPCRQ9BSD7 190 aaKnown RBP10.47□□□□□ -0.73
PHGDH-212ENST00000641247 PLEKHA5Q9HAU0 1116 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 TRPC7Q9HCX4 862 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 ORC3Q9UBD5 711 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-212ENST00000641247 ZMYM5Q9UJ78 669 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 ASXL3Q9C0F0 2248 aa10.47□□□□□ -0.73
PHGDH-212ENST00000641247 PCDH15Q96QU1 1955 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 A0A0A0MRY4 1105 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 TCRBV21S2A2A0A5A6 115 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 ANO9A1A5B4 782 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 FAM149AA5PLN7 773 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 ALDH1A2O94788 518 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 ODC1P11926 461 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 XBP1P17861 261 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 PDCP20941 246 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 MAOBP27338 520 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 CCT6AP40227 531 aaKnown RBP10.46□□□□□ -0.73
PHGDH-212ENST00000641247 RPL6Q02878 288 aaKnown RBP10.46□□□□□ -0.73
PHGDH-212ENST00000641247 HNRNPDQ14103 355 aaKnown RBP10.46□□□□□ -0.73
PHGDH-212ENST00000641247 ZNF174Q15697 407 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 RINT1Q6NUQ1 792 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 C1orf186Q6ZWK4 172 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 KCNK18Q7Z418 384 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 NAXDQ8IW45 347 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 DIS3L2Q8IYB7 885 aaKnown RBP10.46□□□□□ -0.73
PHGDH-212ENST00000641247 PGBD3Q8N328 593 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 ZNF843Q8N446 348 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 C4orf32Q8N8J7 132 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 TMEM161BQ8NDZ6 487 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 CEP76Q8TAP6 659 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 SPPL2BQ8TCT7 592 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 ERLEC1Q96DZ1 483 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 IL21RQ9HBE5 538 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 DDX19AQ9NUU7 478 aaKnown RBP10.46□□□□□ -0.73
PHGDH-212ENST00000641247 BCCIPQ9P287 314 aaKnown RBP eCLIP10.46□□□□□ -0.73
PHGDH-212ENST00000641247 DKK4Q9UBT3 224 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 PCOLCE2Q9UKZ9 415 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 RAI2Q9Y5P3 530 aa10.46□□□□□ -0.73
PHGDH-212ENST00000641247 APC2O95996 2303 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 TNRC6BQ9UPQ9 1833 aaKnown RBP10.45□□□□□ -0.74
PHGDH-212ENST00000641247 IGHV1OR15-9A0A0B4J2B8 117 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 CYB561D2O14569 222 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 CLDN3O15551 220 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 JAK2O60674 1132 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 PRPF40AO75400 957 aaKnown RBP10.45□□□□□ -0.74
PHGDH-212ENST00000641247 CDKL5O76039 1030 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 NOL4O94818 638 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 DKK1O94907 266 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 CYP17A1P05093 508 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 NFICP08651 508 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 CLTAP09496 248 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 USP17L7P0C7H9 530 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 ATXN1LP0C7T5 689 aaKnown RBP10.45□□□□□ -0.74
PHGDH-212ENST00000641247 MAPTP10636 758 aaKnown RBP10.45□□□□□ -0.74
PHGDH-212ENST00000641247 GABRG2P18507 467 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 SYT1P21579 422 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 CYP2F1P24903 491 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 HOXD12P35452 270 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 SLC14A1Q13336 389 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 TAF3Q5VWG9 929 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 JADE1Q6IE81 842 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 RHBDF2Q6PJF5 856 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 PCSK4Q6UW60 755 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 GLRX5Q86SX6 157 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 MIB1Q86YT6 1006 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 PIP4K2CQ8TBX8 421 aa10.45□□□□□ -0.74
PHGDH-212ENST00000641247 EXOC4Q96A65 974 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms