RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 FAM49BQ9NUQ9 324 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 IGSF9Q9P2J2 1179 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 NFE2L3Q9Y4A8 694 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 NUMBLQ9Y6R0 609 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 DENND4CQ5VZ89 1909 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 BEST1O76090 585 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 ALADP13716 330 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 FCARP24071 287 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 USP46P62068 366 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 TYRO3Q06418 890 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 STX1AQ16623 288 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 KLHL40Q2TBA0 621 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 ZNF394Q53GI3 561 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 FAM78AQ5JUQ0 283 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 MIIPQ5JXC2 388 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 SLC4A11Q8NBS3 891 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 ZMIZ2Q8NF64 920 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 SLC2A14Q8TDB8 520 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 EDAQ92838 391 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 SORCS3Q9UPU3 1222 aa28.37■■■□□ 2.13
VEGFA-231ENST00000640499 OBSL1O75147 1896 aa28.36■■■□□ 2.13
VEGFA-231ENST00000640499 TECTAO75443 2155 aa28.36■■■□□ 2.13
VEGFA-231ENST00000640499 TADA3O75528 432 aa28.36■■■□□ 2.13
VEGFA-231ENST00000640499 CSH1P0DML2 217 aa28.36■■■□□ 2.13
VEGFA-231ENST00000640499 CSH2P0DML3 217 aa28.36■■■□□ 2.13
VEGFA-231ENST00000640499 ACO1P21399 889 aaKnown RBP28.36■■■□□ 2.13
VEGFA-231ENST00000640499 MTIF2P46199 727 aaKnown RBP28.36■■■□□ 2.13
VEGFA-231ENST00000640499 PHLDB3Q6NSJ2 640 aa28.36■■■□□ 2.13
VEGFA-231ENST00000640499 TRMT2BQ96GJ1 504 aaKnown RBP28.36■■■□□ 2.13
VEGFA-231ENST00000640499 NT5C1BQ96P26 610 aa28.36■■■□□ 2.13
VEGFA-231ENST00000640499 SMOQ99835 787 aa28.36■■■□□ 2.13
VEGFA-231ENST00000640499 CRACR2AQ9BSW2 395 aa28.36■■■□□ 2.13
VEGFA-231ENST00000640499 PLA2G2FQ9BZM2 168 aa28.36■■■□□ 2.13
VEGFA-231ENST00000640499 INTS2Q9H0H0 1204 aaKnown RBP28.36■■■□□ 2.13
VEGFA-231ENST00000640499 ATXN3LQ9H3M9 355 aa28.36■■■□□ 2.13
VEGFA-231ENST00000640499 MAGED2Q9UNF1 606 aaPredicted RBP28.36■■■□□ 2.13
VEGFA-231ENST00000640499 CYP4F8P98187 520 aa28.35■■■□□ 2.13
VEGFA-231ENST00000640499 TDGQ13569 410 aa28.35■■■□□ 2.13
VEGFA-231ENST00000640499 CDKAL1Q5VV42 579 aa28.35■■■□□ 2.13
VEGFA-231ENST00000640499 TANGO2Q6ICL3 276 aa28.35■■■□□ 2.13
VEGFA-231ENST00000640499 KREMEN1Q96MU8 473 aa28.35■■■□□ 2.13
VEGFA-231ENST00000640499 ASB16Q96NS5 453 aa28.35■■■□□ 2.13
VEGFA-231ENST00000640499 HNRNPABQ99729 332 aaKnown RBP28.35■■■□□ 2.13
VEGFA-231ENST00000640499 FUCA2Q9BTY2 467 aa28.35■■■□□ 2.13
VEGFA-231ENST00000640499 FAM124BQ9H5Z6 455 aaPredicted RBP28.35■■■□□ 2.13
VEGFA-231ENST00000640499 NCANO14594 1321 aa28.35■■■□□ 2.13
VEGFA-231ENST00000640499 KCNJ18B7U540 433 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 TRIM66O15016 1216 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 NARSO43776 548 aaKnown RBP28.34■■■□□ 2.13
VEGFA-231ENST00000640499 SLC9A1P19634 815 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 APBA1Q02410 837 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 KCNJ12Q14500 433 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 NCAPHQ15003 741 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 MAN2A1Q16706 1144 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 DPY19L2P1Q6NXN4 242 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 RRAGAQ7L523 313 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 NXPE3Q969Y0 559 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 CYFIP2Q96F07 1278 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 TMEM176AQ96HP8 235 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 CEP295NLQ96MC4 621 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 TUBGCP2Q9BSJ2 902 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 MED10Q9BTT4 135 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 HSD3B7Q9H2F3 369 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 CSNK1G1Q9HCP0 422 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 FANCLQ9NW38 375 aa28.34■■■□□ 2.13
VEGFA-231ENST00000640499 RNF225M0QZC1 329 aaPredicted RBP28.33■■■□□ 2.13
VEGFA-231ENST00000640499 TNFRSF10BO14763 440 aa28.33■■■□□ 2.13
VEGFA-231ENST00000640499 FGF19O95750 216 aa28.33■■■□□ 2.13
VEGFA-231ENST00000640499 CETN1Q12798 172 aa28.33■■■□□ 2.13
VEGFA-231ENST00000640499 TAF12Q16514 161 aa28.33■■■□□ 2.13
VEGFA-231ENST00000640499 TCP11X2Q5H9J9 407 aa28.33■■■□□ 2.13
VEGFA-231ENST00000640499 PPP1R26Q5T8A7 1209 aaPredicted RBP28.33■■■□□ 2.13
VEGFA-231ENST00000640499 FAM114A1Q8IWE2 563 aa28.33■■■□□ 2.13
VEGFA-231ENST00000640499 ZSCAN18Q8TBC5 510 aaPredicted RBP28.33■■■□□ 2.13
VEGFA-231ENST00000640499 RSPRY1Q96DX4 576 aa28.33■■■□□ 2.13
VEGFA-231ENST00000640499 SMARCD1Q96GM5 515 aa28.33■■■□□ 2.13
VEGFA-231ENST00000640499 KXD1Q9BQD3 176 aa28.33■■■□□ 2.13
VEGFA-231ENST00000640499 SLC46A2Q9BY10 475 aa28.33■■■□□ 2.13
VEGFA-231ENST00000640499 KRT82Q9NSB4 513 aa28.33■■■□□ 2.13
VEGFA-231ENST00000640499 ZNF638Q14966 1978 aaKnown RBP28.33■■■□□ 2.13
VEGFA-231ENST00000640499 AP1G2O75843 785 aa28.32■■■□□ 2.12
VEGFA-231ENST00000640499 TBXAS1P24557 533 aaPredicted RBP28.32■■■□□ 2.12
VEGFA-231ENST00000640499 ADORA2BP29275 332 aa28.32■■■□□ 2.12
VEGFA-231ENST00000640499 CDC25CP30307 473 aa28.32■■■□□ 2.12
VEGFA-231ENST00000640499 VWA3BQ502W6 1294 aa28.32■■■□□ 2.12
VEGFA-231ENST00000640499 GPR158Q5T848 1215 aa28.32■■■□□ 2.12
VEGFA-231ENST00000640499 DENND5BQ6ZUT9 1274 aa28.32■■■□□ 2.12
VEGFA-231ENST00000640499 GPIHBP1Q8IV16 184 aa28.32■■■□□ 2.12
VEGFA-231ENST00000640499 PPM1KQ8N3J5 372 aa28.32■■■□□ 2.12
VEGFA-231ENST00000640499 TTC39CQ8N584 583 aa28.32■■■□□ 2.12
VEGFA-231ENST00000640499 HEXIM2Q96MH2 286 aaKnown RBP28.32■■■□□ 2.12
VEGFA-231ENST00000640499 TTLL2Q9BWV7 592 aa28.32■■■□□ 2.12
VEGFA-231ENST00000640499 GCNT4Q9P109 453 aa28.32■■■□□ 2.12
VEGFA-231ENST00000640499 ANAPC1Q9H1A4 1944 aa28.31■■■□□ 2.12
VEGFA-231ENST00000640499 FAM86C2PA6NEL3 165 aa28.31■■■□□ 2.12
VEGFA-231ENST00000640499 ANXA13P27216 316 aa28.31■■■□□ 2.12
VEGFA-231ENST00000640499 VIPR2P41587 438 aa28.31■■■□□ 2.12
VEGFA-231ENST00000640499 GJB7Q6PEY0 223 aa28.31■■■□□ 2.12
VEGFA-231ENST00000640499 TRIM65Q6PJ69 517 aa28.31■■■□□ 2.12
VEGFA-231ENST00000640499 MTSS1LQ765P7 747 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms