RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 BBS12Q6ZW61 710 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 SPATA21Q7Z572 469 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 CCDC125Q86Z20 511 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 UNC45BQ8IWX7 931 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 KCTD6Q8NC69 237 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 THOC1Q96FV9 657 aaKnown RBP11.13□□□□□ -0.63
NECAP1-216ENST00000639167 HEXIM2Q96MH2 286 aaKnown RBP11.13□□□□□ -0.63
NECAP1-216ENST00000639167 TTC25Q96NG3 672 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 CALN1Q9BXU9 219 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 RAB6CQ9H0N0 254 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 AKT3Q9Y243 479 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 A0A1W2PPM1 405 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 FAM47DPA6NHR8 397 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 CLGNO14967 610 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 CILPO75339 1184 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 SUN1O94901 812 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 TAC1P20366 129 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 SSTR1P30872 391 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 RPL22P35268 128 aaKnown RBP11.13□□□□□ -0.63
NECAP1-216ENST00000639167 PHKA2P46019 1235 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 GPX6P59796 221 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 TTLL4Q14679 1199 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 HIF1AQ16665 826 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 CCDC142Q17RM4 750 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 MSS51Q4VC12 460 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 FNBP1LQ5T0N5 605 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 FAM102AQ5T9C2 384 aaPredicted RBP11.13□□□□□ -0.63
NECAP1-216ENST00000639167 SH3PXD2AQ5TCZ1 1133 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 TMCO4Q5TGY1 634 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 NPNTQ6UXI9 565 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 PPP1R21Q6ZMI0 780 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 PARP9Q8IXQ6 854 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 RIBC1Q8N443 379 aaPredicted RBP11.13□□□□□ -0.63
NECAP1-216ENST00000639167 RSAD2Q8WXG1 361 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 CPT1BQ92523 772 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 TMEM176AQ96HP8 235 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 SGSM3Q96HU1 749 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 MAGEB18Q96M61 343 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 TRABDQ9H4I3 376 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 PDZD7Q9H5P4 517 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 ADARB2Q9NS39 739 aaKnown RBP11.13□□□□□ -0.63
NECAP1-216ENST00000639167 PRMT7Q9NVM4 692 aaPredicted RBP11.13□□□□□ -0.63
NECAP1-216ENST00000639167 SHOC2Q9UQ13 582 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 ACTL7BQ9Y614 415 aa11.13□□□□□ -0.63
NECAP1-216ENST00000639167 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
NECAP1-216ENST00000639167 CXCL11O14625 94 aa11.12□□□□□ -0.63
NECAP1-216ENST00000639167 GRAP2O75791 330 aa11.12□□□□□ -0.63
NECAP1-216ENST00000639167 ZNF286BP0CG31 522 aa11.12□□□□□ -0.63
NECAP1-216ENST00000639167 GTF2A1P52655 376 aaPredicted RBP11.12□□□□□ -0.63
NECAP1-216ENST00000639167 MMRN1Q13201 1228 aa11.12□□□□□ -0.63
NECAP1-216ENST00000639167 AMHR2Q16671 573 aa11.12□□□□□ -0.63
NECAP1-216ENST00000639167 MAP1SQ66K74 1059 aaPredicted RBP11.12□□□□□ -0.63
NECAP1-216ENST00000639167 TBC1D1Q86TI0 1168 aaPredicted RBP11.12□□□□□ -0.63
NECAP1-216ENST00000639167 PPIL6Q8IXY8 311 aa11.12□□□□□ -0.63
NECAP1-216ENST00000639167 ANKRD13AQ8IZ07 590 aa11.12□□□□□ -0.63
NECAP1-216ENST00000639167 CCDC63Q8NA47 563 aa11.12□□□□□ -0.63
NECAP1-216ENST00000639167 CXorf38Q8TB03 319 aa11.12□□□□□ -0.63
NECAP1-216ENST00000639167 SPOCK2Q92563 424 aa11.12□□□□□ -0.63
NECAP1-216ENST00000639167 HPDLQ96IR7 371 aa11.12□□□□□ -0.63
NECAP1-216ENST00000639167 PIWIL1Q96J94 861 aaKnown RBP11.12□□□□□ -0.63
NECAP1-216ENST00000639167 ADPGKQ9BRR6 497 aa11.12□□□□□ -0.63
NECAP1-216ENST00000639167 ERAP1Q9NZ08 941 aa11.12□□□□□ -0.63
NECAP1-216ENST00000639167 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.12□□□□□ -0.63
NECAP1-216ENST00000639167 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
NECAP1-216ENST00000639167 CLUHO75153 1309 aa11.12□□□□□ -0.63
NECAP1-216ENST00000639167 TRUB2O95900 331 aaKnown RBP11.11□□□□□ -0.63
NECAP1-216ENST00000639167 LGALS2P05162 132 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 GSTA1P08263 222 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 ARF4P18085 180 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-216ENST00000639167 CYP3A5P20815 502 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 GPD2P43304 727 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 SLC26A2P50443 739 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 EIF3EP60228 445 aaKnown RBP11.11□□□□□ -0.63
NECAP1-216ENST00000639167 IL9RQ01113 521 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 MGAT5Q09328 741 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 MOGSQ13724 837 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 ZNF268Q14587 947 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-216ENST00000639167 CDO1Q16878 200 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 SLC10A6Q3KNW5 377 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 SYCP2LQ5T4T6 812 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 ARMCX2Q7L311 632 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 NAT8LQ8N9F0 302 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 FAM71DQ8N9W8 422 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 FNIP1Q8TF40 1166 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 OPTNQ96CV9 577 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 MCRS1Q96EZ8 462 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 RMDN2Q96LZ7 410 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 PEBP4Q96S96 227 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 WDR83Q9BRX9 315 aaKnown RBP11.11□□□□□ -0.63
NECAP1-216ENST00000639167 WDR35Q9P2L0 1181 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 PNMA3Q9UL41 463 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 USP18Q9UMW8 372 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 ARL2BPQ9Y2Y0 163 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 RNF8O76064 485 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 TMEM63AO94886 807 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 CYP2C8P10632 490 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 RBP3P10745 1247 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 MCF2P10911 925 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 OSBPP22059 807 aa11.11□□□□□ -0.63
NECAP1-216ENST00000639167 RPA3P35244 121 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms