RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 DIRC3C9JPN6 131 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 NPIPB8E9PQR5 432 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 J3KRW8 73 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 M0QYG6 137 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 IPO5O00410 1097 aaKnown RBP3.46□□□□□ -1.86
GYPB-216ENST00000638448 EPB41L2O43491 1005 aaKnown RBP3.46□□□□□ -1.86
GYPB-216ENST00000638448 RASSF9O75901 435 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 AGFG2O95081 481 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 NTSR2O95665 410 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 NDST3O95803 873 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 CKBP12277 381 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 ACO1P21399 889 aaKnown RBP3.46□□□□□ -1.86
GYPB-216ENST00000638448 BDNFP23560 247 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 PPIFP30405 207 aaKnown RBP3.46□□□□□ -1.86
GYPB-216ENST00000638448 MAPK9P45984 424 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 RXRGP48443 463 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 PTTG1IPP53801 180 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 LOXL3P58215 753 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 PSMC1P62191 440 aaKnown RBP3.46□□□□□ -1.86
GYPB-216ENST00000638448 SLFN5Q08AF3 891 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 FOXE3Q13461 319 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 IQCB1Q15051 598 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 ADCK5Q3MIX3 580 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 TRIM60Q495X7 471 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.46□□□□□ -1.86
GYPB-216ENST00000638448 MIIPQ5JXC2 388 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 PLAG1Q6DJT9 500 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 EFCAB12Q6NXP0 572 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 JMJD6Q6NYC1 403 aaPredicted RBP3.46□□□□□ -1.86
GYPB-216ENST00000638448 Q6ZSN1 163 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 TMPRSS9Q7Z410 1059 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 POLNQ7Z5Q5 900 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 LRRTM4Q86VH4 590 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 MPP5Q8N3R9 675 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 PDPRQ8NCN5 879 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 SLC30A5Q8TAD4 765 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 HERVK_113Q902F9 699 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 ST8SIA2Q92186 375 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 EDAQ92838 391 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 ZNF503Q96F45 646 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 LRRC46Q96FV0 321 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 PYM1Q9BRP8 204 aaKnown RBP3.46□□□□□ -1.86
GYPB-216ENST00000638448 NUDT22Q9BRQ3 303 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 REXO4Q9GZR2 422 aaKnown RBP3.46□□□□□ -1.86
GYPB-216ENST00000638448 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.46□□□□□ -1.86
GYPB-216ENST00000638448 TWSG1Q9GZX9 223 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 C12orf65Q9H3J6 166 aaKnown RBP3.46□□□□□ -1.86
GYPB-216ENST00000638448 AGO3Q9H9G7 860 aaKnown RBP3.46□□□□□ -1.86
GYPB-216ENST00000638448 PRDM8Q9NQV8 689 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 IGSF9Q9P2J2 1179 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 NCDNQ9UBB6 729 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 DNMT3BQ9UBC3 853 aaKnown RBP3.46□□□□□ -1.86
GYPB-216ENST00000638448 HDAC9Q9UKV0 1011 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 NFU1Q9UMS0 254 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 SLC45A2Q9UMX9 530 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 AGAP1Q9UPQ3 857 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 HDAC5Q9UQL6 1122 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 CDY1Q9Y6F8 540 aa3.46□□□□□ -1.86
GYPB-216ENST00000638448 SPATA31A3Q5VYP0 1347 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 ITIH6Q6UXX5 1313 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 CCDC196A0A1B0GTZ2 297 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 AQP12BA6NM10 295 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 TMEM233B4DJY2 109 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 OVOL3O00110 214 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 EIF3FO00303 357 aaPredicted RBP3.45□□□□□ -1.86
GYPB-216ENST00000638448 TRIM38O00635 465 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 RRP9O43818 475 aaKnown RBP3.45□□□□□ -1.86
GYPB-216ENST00000638448 ZNF202O95125 648 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 HSP90AA1P07900 732 aaKnown RBP3.45□□□□□ -1.86
GYPB-216ENST00000638448 FAM163BP0C2L3 166 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 TPH1P17752 444 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 ADD2P35612 726 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 PHKA1P46020 1223 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 PAPOLAP51003 745 aaKnown RBP3.45□□□□□ -1.86
GYPB-216ENST00000638448 EIF5P55010 431 aaKnown RBP3.45□□□□□ -1.86
GYPB-216ENST00000638448 GEMIN4P57678 1058 aaKnown RBP3.45□□□□□ -1.86
GYPB-216ENST00000638448 DGCR2P98153 550 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 ZNF844Q08AG5 666 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 TAF12Q16514 161 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 ZNF750Q32MQ0 723 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 PLA1AQ53H76 456 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 FAXCQ5TGI0 409 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 AGAP9Q5VTM2 703 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 ANKS6Q68DC2 871 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 CCDC28AQ8IWP9 274 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 RHOT2Q8IXI1 618 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 CFAP52Q8N1V2 620 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 NME8Q8N427 588 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 ZNF808Q8N4W9 903 aaPredicted RBP3.45□□□□□ -1.86
GYPB-216ENST00000638448 PCSK9Q8NBP7 692 aaKnown RBP3.45□□□□□ -1.86
GYPB-216ENST00000638448 FAM46DQ8NEK8 389 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 TBC1D15Q8TC07 691 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 POC1BQ8TC44 478 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 IPO4Q8TEX9 1081 aaKnown RBP3.45□□□□□ -1.86
GYPB-216ENST00000638448 EXTL1Q92935 676 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 PNKPQ96T60 521 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 SMOQ99835 787 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 SORBS1Q9BX66 1292 aaKnown RBP3.45□□□□□ -1.86
GYPB-216ENST00000638448 TRIM5Q9C035 493 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 PCDHAC1Q9H158 963 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms