RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 CEP57Q86XR8 500 aa22.25■■□□□ 1.15
CLN8-213ENST00000637156 C3orf20Q8ND61 904 aa22.25■■□□□ 1.15
CLN8-213ENST00000637156 B3GALT6Q96L58 329 aa22.25■■□□□ 1.15
CLN8-213ENST00000637156 SYNCQ9H7C4 482 aa22.25■■□□□ 1.15
CLN8-213ENST00000637156 CXXC1Q9P0U4 656 aaPredicted RBP22.25■■□□□ 1.15
CLN8-213ENST00000637156 SNX12Q9UMY4 172 aa22.25■■□□□ 1.15
CLN8-213ENST00000637156 MRFAP1Q9Y605 127 aa22.25■■□□□ 1.15
CLN8-213ENST00000637156 SCINQ9Y6U3 715 aa22.25■■□□□ 1.15
CLN8-213ENST00000637156 LTBP2Q14767 1821 aa22.25■■□□□ 1.15
CLN8-213ENST00000637156 COL4A6Q14031 1691 aa22.25■■□□□ 1.15
CLN8-213ENST00000637156 TMEM191CA6NGB0 347 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 RIOK3O14730 519 aaKnown RBP22.24■■□□□ 1.15
CLN8-213ENST00000637156 EFEMP2O95967 443 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 PRLRP16471 622 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 FGFR3P22607 806 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 RPL34P49207 117 aaKnown RBP22.24■■□□□ 1.15
CLN8-213ENST00000637156 VARS2Q5ST30 1063 aaKnown RBP22.24■■□□□ 1.15
CLN8-213ENST00000637156 TMEM240Q5SV17 173 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 MCRS1Q96EZ8 462 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 MYO1FO00160 1098 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 GSCP56915 257 aaPredicted RBP22.24■■□□□ 1.15
CLN8-213ENST00000637156 C11orf63Q6NUN7 778 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 CLEC20AQ6ZU45 233 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 CPNE8Q86YQ8 564 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 SCUBE3Q8IX30 993 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 MSANTD4Q8NCY6 345 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.24■■□□□ 1.155e-8■■■■□ 21.4
CLN8-213ENST00000637156 MED10Q9BTT4 135 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 WDR35Q9P2L0 1181 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 CDC23Q9UJX2 597 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 AMFRQ9UKV5 643 aa22.24■■□□□ 1.15
CLN8-213ENST00000637156 ALPK3Q96L96 1907 aa22.23■■□□□ 1.15
CLN8-213ENST00000637156 SIGLEC16A6NMB1 481 aa22.23■■□□□ 1.15
CLN8-213ENST00000637156 ZBBXA8MT70 800 aa22.23■■□□□ 1.15
CLN8-213ENST00000637156 NPR3P17342 541 aa22.23■■□□□ 1.15
CLN8-213ENST00000637156 COMTP21964 271 aa22.23■■□□□ 1.15
CLN8-213ENST00000637156 PLA2G4AP47712 749 aa22.23■■□□□ 1.15
CLN8-213ENST00000637156 CACNA2D1P54289 1103 aa22.23■■□□□ 1.15
CLN8-213ENST00000637156 BTG3Q14201 252 aaPredicted RBP22.23■■□□□ 1.15
CLN8-213ENST00000637156 DNAJC24Q6P3W2 148 aa22.23■■□□□ 1.15
CLN8-213ENST00000637156 HES6Q96HZ4 224 aa22.23■■□□□ 1.15
CLN8-213ENST00000637156 KCNK16Q96T55 309 aa22.23■■□□□ 1.15
CLN8-213ENST00000637156 PSMB7Q99436 277 aa22.23■■□□□ 1.15
CLN8-213ENST00000637156 TMEM30AQ9NV96 361 aa22.23■■□□□ 1.15
CLN8-213ENST00000637156 SF3B1O75533 1304 aaKnown RBP eCLIP22.23■■□□□ 1.151e-10■■■■■ 241.2
CLN8-213ENST00000637156 TMEM110-MUSTN1A8MSY1 372 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 GOLGA8SH3BPF8 625 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 ZNF185O15231 689 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 OR4Q2P0C623 313 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 KRT3P12035 628 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 CXCR5P32302 372 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 RFC1P35251 1148 aaPredicted RBP22.22■■□□□ 1.15
CLN8-213ENST00000637156 RPS6KA1Q15418 735 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 KCNT2Q6UVM3 1135 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 PIGZQ86VD9 579 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 MYLPFQ96A32 169 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 IGSF21Q96ID5 467 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 HSFY1Q96LI6 401 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 XPO1O14980 1071 aaKnown RBP22.22■■□□□ 1.15
CLN8-213ENST00000637156 PAPSS1O43252 624 aaPredicted RBP22.22■■□□□ 1.15
CLN8-213ENST00000637156 RABGGTBP53611 331 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 MAP3K7CLP57077 242 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 RTP2Q5QGT7 225 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 FAM35AQ86V20 835 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 CMTR2Q8IYT2 770 aaKnown RBP22.22■■□□□ 1.15
CLN8-213ENST00000637156 ZMIZ2Q8NF64 920 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 IPO4Q8TEX9 1081 aaKnown RBP22.22■■□□□ 1.15
CLN8-213ENST00000637156 COG1Q8WTW3 980 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 PIWIL1Q96J94 861 aaKnown RBP22.22■■□□□ 1.15
CLN8-213ENST00000637156 MCEEQ96PE7 176 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 OSBPL9Q96SU4 736 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 SMOQ99835 787 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 SELENOOQ9BVL4 669 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 RHOBTB2Q9BYZ6 727 aa22.22■■□□□ 1.15
CLN8-213ENST00000637156 ZMYND8Q9ULU4 1186 aaPredicted RBP22.22■■□□□ 1.15
CLN8-213ENST00000637156 MRPL42Q9Y6G3 142 aaKnown RBP22.22■■□□□ 1.15
CLN8-213ENST00000637156 AP1G2O75843 785 aa22.21■■□□□ 1.15
CLN8-213ENST00000637156 GJB5O95377 273 aa22.21■■□□□ 1.15
CLN8-213ENST00000637156 FAM200BP0CF97 657 aa22.21■■□□□ 1.15
CLN8-213ENST00000637156 DNA2P51530 1060 aa22.21■■□□□ 1.15
CLN8-213ENST00000637156 TSPY1Q01534 308 aa22.21■■□□□ 1.15
CLN8-213ENST00000637156 OGDHQ02218 1023 aa22.21■■□□□ 1.15
CLN8-213ENST00000637156 ELAVL2Q12926 359 aaKnown RBP22.21■■□□□ 1.15
CLN8-213ENST00000637156 SPOUT1Q5T280 376 aaKnown RBP22.21■■□□□ 1.15
CLN8-213ENST00000637156 OR6B2Q6IFH4 312 aa22.21■■□□□ 1.15
CLN8-213ENST00000637156 DCUN1D2Q6PH85 259 aa22.21■■□□□ 1.15
CLN8-213ENST00000637156 FAM183BPQ6ZVS7 135 aa22.21■■□□□ 1.15
CLN8-213ENST00000637156 JOSD2Q8TAC2 188 aa22.21■■□□□ 1.15
CLN8-213ENST00000637156 KHSRPQ92945 711 aaKnown RBP eCLIP22.21■■□□□ 1.15
CLN8-213ENST00000637156 YME1L1Q96TA2 773 aa22.21■■□□□ 1.15
CLN8-213ENST00000637156 VN1R3Q9BXE9 311 aa22.21■■□□□ 1.15
CLN8-213ENST00000637156 ZCWPW1Q9H0M4 648 aa22.21■■□□□ 1.15
CLN8-213ENST00000637156 KRT82Q9NSB4 513 aa22.21■■□□□ 1.15
CLN8-213ENST00000637156 BDNFP23560 247 aa22.2■■□□□ 1.14
CLN8-213ENST00000637156 SLC8A3P57103 927 aa22.2■■□□□ 1.14
CLN8-213ENST00000637156 TUBB2AQ13885 445 aa22.2■■□□□ 1.14
CLN8-213ENST00000637156 HTATIP2Q9BUP3 242 aa22.2■■□□□ 1.14
CLN8-213ENST00000637156 TUBB2BQ9BVA1 445 aa22.2■■□□□ 1.14
CLN8-213ENST00000637156 MIS12Q9H081 205 aa22.2■■□□□ 1.14
CLN8-213ENST00000637156 CSNK1G1Q9HCP0 422 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms