RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 GRIK4Q16099 956 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 UBAP2Q5T6F2 1119 aaKnown RBP12.73□□□□□ -0.37
CLN8-212ENST00000637083 RNASEH2BQ5TBB1 312 aaKnown RBP12.73□□□□□ -0.37
CLN8-212ENST00000637083 LCLAT1Q6UWP7 414 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 PIGWQ7Z7B1 504 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 PNMA8AQ86V59 439 aaPredicted RBP12.73□□□□□ -0.37
CLN8-212ENST00000637083 PPIL6Q8IXY8 311 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 JOSD2Q8TAC2 188 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 SGSM3Q96HU1 749 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 C9orf72Q96LT7 481 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 PLCD4Q9BRC7 762 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 KDM4CQ9H3R0 1056 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 SLC5A4Q9NY91 659 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 CYTH4Q9UIA0 394 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 NAALADL1Q9UQQ1 740 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 CAPN7Q9Y6W3 813 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 ANK1P16157 1881 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 APOC4-APOC2K7ER74 178 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 ALOX15BO15296 676 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 IFNB1P01574 187 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 APOC2P02655 101 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 VTNP04004 478 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 GPD1P21695 349 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 ADCYAP1R1P41586 468 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 ZNF143P52747 638 aaPredicted RBP12.72□□□□□ -0.37
CLN8-212ENST00000637083 OTUD4Q01804 1114 aaKnown RBP12.72□□□□□ -0.37
CLN8-212ENST00000637083 ACTN3Q08043 901 aaPredicted RBP12.72□□□□□ -0.37
CLN8-212ENST00000637083 RASA2Q15283 850 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 DGKDQ16760 1214 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 DUSP28Q4G0W2 176 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 CCDC38Q502W7 563 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 FAM47CQ5HY64 1035 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 GJC2Q5T442 439 aaPredicted RBP12.72□□□□□ -0.37
CLN8-212ENST00000637083 FAM102AQ5T9C2 384 aaPredicted RBP12.72□□□□□ -0.37
CLN8-212ENST00000637083 IQSEC1Q6DN90 963 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 TXNRD3NBQ6F5E7 133 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 ANKRD23Q86SG2 305 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 RFX6Q8HWS3 928 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 MAP7D3Q8IWC1 876 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 CCDC13Q8IYE1 715 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 CMASQ8NFW8 434 aaPredicted RBP12.72□□□□□ -0.37
CLN8-212ENST00000637083 CNPY3Q9BT09 278 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 ABHD16BQ9H3Z7 469 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 MCF2LO15068 1137 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 TRUB2O95900 331 aaKnown RBP12.72□□□□□ -0.37
CLN8-212ENST00000637083 ZNF286BP0CG31 522 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 HOXD8P13378 290 aaPredicted RBP12.72□□□□□ -0.37
CLN8-212ENST00000637083 PECAM1P16284 738 aaPredicted RBP12.72□□□□□ -0.37
CLN8-212ENST00000637083 STIP1P31948 543 aaKnown RBP12.72□□□□□ -0.37
CLN8-212ENST00000637083 NDST1P52848 882 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 YARSP54577 528 aaKnown RBP12.72□□□□□ -0.37
CLN8-212ENST00000637083 ARL4CP56559 192 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 LACTB2Q53H82 288 aaPredicted RBP12.72□□□□□ -0.37
CLN8-212ENST00000637083 LRRC34Q8IZ02 419 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 ACTL9Q8TC94 416 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 KIF12Q96FN5 646 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 MS4A4AQ96JQ5 239 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 TWNKQ96RR1 684 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 TMEM121Q9BTD3 319 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 GCOM2Q9BZD3 368 aaPredicted RBP12.72□□□□□ -0.37
CLN8-212ENST00000637083 FETUBQ9UGM5 382 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 SLC24A2Q9UI40 661 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 USP18Q9UMW8 372 aa12.72□□□□□ -0.37
CLN8-212ENST00000637083 TSHRP16473 764 aa12.71□□□□□ -0.37
CLN8-212ENST00000637083 ATP2A2P16615 1042 aaKnown RBP12.71□□□□□ -0.37
CLN8-212ENST00000637083 MIPP30301 263 aa12.71□□□□□ -0.37
CLN8-212ENST00000637083 STX2P32856 288 aa12.71□□□□□ -0.37
CLN8-212ENST00000637083 PPARDQ03181 441 aa12.71□□□□□ -0.37
CLN8-212ENST00000637083 OR6B2Q6IFH4 312 aa12.71□□□□□ -0.37
CLN8-212ENST00000637083 CYP4F22Q6NT55 531 aa12.71□□□□□ -0.37
CLN8-212ENST00000637083 ZDHHC17Q8IUH5 632 aa12.71□□□□□ -0.37
CLN8-212ENST00000637083 OR6J1Q8NGC5 347 aa12.71□□□□□ -0.37
CLN8-212ENST00000637083 HAUS1Q96CS2 278 aa12.71□□□□□ -0.37
CLN8-212ENST00000637083 KATNBL1Q9H079 304 aa12.71□□□□□ -0.37
CLN8-212ENST00000637083 TSPAN16Q9UKR8 245 aa12.71□□□□□ -0.37
CLN8-212ENST00000637083 CCL15-CCL14A0A0B4J2E2 113 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 RASA4BC9J798 803 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 RASA4O43374 803 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 PRPSAP2O60256 369 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 CAPN15O75808 1086 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 MMP3P08254 477 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 ZSCAN5DPP0CG00 497 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 IL1R2P27930 398 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 IFNAR2P48551 515 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 SLC18A1P54219 525 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 DYNLT1P63172 113 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 PDK2Q15119 407 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 CCL15Q16663 113 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 HIF1AQ16665 826 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 SMTNL2Q2TAL5 461 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 BOLA3Q53S33 107 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 KCNT1Q5JUK3 1230 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 SLC27A1Q6PCB7 646 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 VSTM1Q6UX27 236 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 UNC93AQ86WB7 457 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 ARFGAP1Q8N6T3 406 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 EMC1Q8N766 993 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 BEST2Q8NFU1 509 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 CKAP2Q8WWK9 683 aa12.71□□□□□ -0.38
CLN8-212ENST00000637083 PRCCQ92733 491 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms