RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 CORO1CQ9ULV4 474 aaPredicted RBP15.25■□□□□ 0.03
CLN6-215ENST00000636674 DNAJC6O75061 913 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 LRCH4O75427 683 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 TGDSO95455 350 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 CST3P01034 146 aaPredicted RBP15.24■□□□□ 0.03
CLN6-215ENST00000636674 POLR2BP30876 1174 aaKnown RBP15.24■□□□□ 0.03
CLN6-215ENST00000636674 RPL22P35268 128 aaKnown RBP15.24■□□□□ 0.03
CLN6-215ENST00000636674 BACE1P56817 501 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 CAPSQ13938 189 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 SURF1Q15526 300 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 SGSM1Q2NKQ1 1148 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 C3orf62Q6ZUJ4 267 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 RHPN2Q8IUC4 686 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 NIM1KQ8IY84 436 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 KIRREL3Q8IZU9 778 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 FBXO36Q8NEA4 188 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 TCP10LQ8TDR4 215 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 LHX5Q9H2C1 402 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 NPHS2Q9NP85 383 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 AGTPBP1Q9UPW5 1226 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 ANK1P16157 1881 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.24■□□□□ 0.03
CLN6-215ENST00000636674 GOLGA8SH3BPF8 625 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 GOLGA8MH3BSY2 632 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 ABLIM1O14639 778 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 FAM155BO75949 473 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 TMEM63AO94886 807 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 PAX7P23759 505 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 PSMA2P25787 234 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 MARK3P27448 753 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 GAD2Q05329 585 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 TARBP2Q15633 366 aaKnown RBP15.24■□□□□ 0.03
CLN6-215ENST00000636674 HADHQ16836 314 aaKnown RBP15.24■□□□□ 0.03
CLN6-215ENST00000636674 SCARA3Q6AZY7 606 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 ARFGAP1Q8N6T3 406 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 ZNF526Q8TF50 670 aaPredicted RBP15.24■□□□□ 0.03
CLN6-215ENST00000636674 TFAP2BQ92481 460 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 NUDCD1Q96RS6 583 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 ACAD9Q9H845 621 aa15.24■□□□□ 0.03
CLN6-215ENST00000636674 APOC4-APOC2K7ER74 178 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 CST8O60676 142 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 APOC2P02655 101 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 KDELR1P24390 212 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 ABL2P42684 1182 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 ETV4P43268 484 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 NEK3P51956 506 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 RAD23BP54727 409 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 MYL6P60660 151 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 YWHAEP62258 255 aaKnown RBP15.23■□□□□ 0.03
CLN6-215ENST00000636674 SLC18A2Q05940 514 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 SEPT7Q16181 437 aaKnown RBP15.23■□□□□ 0.03
CLN6-215ENST00000636674 PTPN20Q4JDL3 420 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 FAM91A1Q658Y4 838 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 MTDHQ86UE4 582 aaKnown RBP15.23■□□□□ 0.03
CLN6-215ENST00000636674 PDIK1LQ8N165 341 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 RSAD2Q8WXG1 361 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 CYTH2Q99418 400 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 TRIM55Q9BYV6 548 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 MTMR12Q9C0I1 747 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 DENND2DQ9H6A0 471 aaPredicted RBP15.23■□□□□ 0.03
CLN6-215ENST00000636674 MANSC1Q9H8J5 431 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 WDR35Q9P2L0 1181 aa15.23■□□□□ 0.03
CLN6-215ENST00000636674 CCDC22O60826 627 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 SPAG6O75602 509 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 TOM1L1O75674 476 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 WEE2P0C1S8 567 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 ATP6V1C1P21283 382 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 IL1R2P27930 398 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 RFC1P35251 1148 aaPredicted RBP15.22■□□□□ 0.03
CLN6-215ENST00000636674 GCKP35557 465 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 ASPAP45381 313 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 PSEN1P49768 467 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 EFNA5P52803 228 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 SP2Q02086 613 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 CXCL9Q07325 125 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 CYP4A22Q5TCH4 519 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 SKA1Q96BD8 255 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 MRRFQ96E11 262 aaKnown RBP15.22■□□□□ 0.03
CLN6-215ENST00000636674 PTCD3Q96EY7 689 aaKnown RBP15.22■□□□□ 0.03
CLN6-215ENST00000636674 APOPT1Q96IL0 206 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 MIPEPQ99797 713 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 TEX13BQ9BXU2 312 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 DCLRE1BQ9H816 532 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 GPBP1L1Q9HC44 474 aaPredicted RBP15.22■□□□□ 0.03
CLN6-215ENST00000636674 POLIQ9UNA4 740 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 PPME1Q9Y570 386 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 NUMBLQ9Y6R0 609 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 IQANK1A0A1B0GTG1 560 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 A6NHS1 94 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 MSCO60682 206 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 HAUS5O94927 633 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 KRT3P12035 628 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 TNFSF9P41273 254 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 ACAP1Q15027 740 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 DUOXA2Q1HG44 320 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 CDCA2Q69YH5 1023 aaPredicted RBP15.22■□□□□ 0.03
CLN6-215ENST00000636674 C4orf50Q6ZRC1 276 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 SH2D5Q6ZV89 423 aa15.22■□□□□ 0.03
CLN6-215ENST00000636674 PALM2Q8IXS6 379 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms