RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 PTPN7P35236 360 aa8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 ALDH1A3P47895 512 aa8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 HUNKP57058 714 aa8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 CTXN1P60606 82 aa8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 FKBP1AP62942 108 aaKnown RBP8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 NKX6-1P78426 367 aaPredicted RBP8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 KHDC1Q4VXA5 237 aaKnown RBP8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 CAVIN4Q5BKX8 364 aa8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 FAM47AQ5JRC9 791 aa8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 ZKSCAN2Q63HK3 967 aa8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 NPNTQ6UXI9 565 aa8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 FTSJ3Q8IY81 847 aaKnown RBP8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 C3orf20Q8ND61 904 aa8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 TDRD7Q8NHU6 1098 aaKnown RBP8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 STON2Q8WXE9 905 aa8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 CDCA5Q96FF9 252 aa8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 FAM84BQ96KN1 310 aaPredicted RBP8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 VRK1Q99986 396 aaPredicted RBP8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 XYLT2Q9H1B5 865 aa8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 TMEM140Q9NV12 185 aa8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 PA2G4Q9UQ80 394 aaKnown RBP8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 FAM205AQ6ZU69 1335 aa8.28□□□□□ -1.08
SMARCA2-239ENST00000635388 LAMB1P07942 1786 aa8.27□□□□□ -1.08
SMARCA2-239ENST00000635388 A0A1W2PRX2 142 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 FRAT2O75474 233 aaPredicted RBP8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 CIAO1O76071 339 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 MALP21145 153 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 FGFR2P21802 821 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 CNR2P34972 360 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 NPEPPSP55786 919 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 APBA1Q02410 837 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 CHAF1AQ13111 956 aaPredicted RBP8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 SNAPC2Q13487 334 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 LLGL1Q15334 1064 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 DLGAP5Q15398 846 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 SURF1Q15526 300 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 FAM214AQ32MH5 1076 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 ANO6Q4KMQ2 910 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 AFMIDQ63HM1 303 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 SLFN13Q68D06 897 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 PDZD4Q76G19 769 aaPredicted RBP8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 ATG9AQ7Z3C6 839 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 RSPH3Q86UC2 560 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 PLXDC1Q8IUK5 500 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 APOBEC3FQ8IUX4 373 aaKnown RBP8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 FAM156AQ8NDB6 213 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 BORCS6Q96GS4 357 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 CDK5RAP3Q96JB5 506 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 C12orf65Q9H3J6 166 aaKnown RBP8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 FAM204AQ9H8W3 233 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 MAN1C1Q9NR34 630 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 CHST12Q9NRB3 414 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 PPP4R1LQ9P1A2 415 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 L1RE1Q9UN81 338 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 SCAF8Q9UPN6 1271 aaKnown RBP8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 POLHQ9Y253 713 aa8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 MYO5AQ9Y4I1 1855 aaKnown RBP8.27□□□□□ -1.09
SMARCA2-239ENST00000635388 A0A088AWK7 358 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 OTOL1A6NHN0 477 aaPredicted RBP8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 FOXN1O15353 648 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 GNAI2P04899 355 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 BMP7P18075 431 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 RBM5P52756 815 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 RAB1AP62820 205 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 MAP2K1Q02750 393 aaPredicted RBP8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 ATP2B3Q16720 1220 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 OTUD7BQ6GQQ9 843 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 HEATR3Q7Z4Q2 680 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 SIAH1Q8IUQ4 282 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 ITPRIPQ8IWB1 547 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 TMEM57Q8N5G2 664 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 LPIN2Q92539 896 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 TTC17Q96AE7 1141 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 SLC39A13Q96H72 371 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 ZBED3Q96IU2 234 aaPredicted RBP8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 GNRHR2Q96P88 292 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 TCF25Q9BQ70 676 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 SLC23A1Q9UHI7 598 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 PCDHA3Q9Y5H8 950 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 DOCK2Q92608 1830 aa8.26□□□□□ -1.09
SMARCA2-239ENST00000635388 MAST2Q6P0Q8 1798 aa8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 CLRN2A0PK11 232 aa8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 CXorf49A8MYA2 514 aaPredicted RBP8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 HOXA3O43365 443 aaPredicted RBP8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 TYRP14679 529 aa8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 NF2P35240 595 aa8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 IL15P40933 162 aaPredicted RBP8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 CTCFP49711 727 aaPredicted RBP8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 MTX1Q13505 466 aa8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 RGMBQ6NW40 437 aa8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 PJA1Q8NG27 643 aa8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 SLC35B2Q8TB61 432 aa8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 TBC1D22AQ8WUA7 517 aa8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 NELFAQ9H3P2 528 aa8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 VEZTQ9HBM0 779 aa8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 LMBRD1Q9NUN5 540 aa8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 MOCS1Q9NZB8 636 aa8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 PCDHAC2Q9Y5I4 1007 aa8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 SSC5DA1L4H1 1573 aa8.25□□□□□ -1.09
SMARCA2-239ENST00000635388 MAST3O60307 1309 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms