RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 TCF7P36402 384 aaPredicted RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 ASPAP45381 313 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 RASSF2P50749 326 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 EIF3EP60228 445 aaKnown RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 PARP6Q2NL67 630 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 IER5Q5VY09 327 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 BBS12Q6ZW61 710 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 NAT8LQ8N9F0 302 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 KLF6Q99612 283 aaPredicted RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 SSU72Q9NP77 194 aaKnown RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 ZNF112Q9UJU3 913 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 CPSF3Q9UKF6 684 aaKnown RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 EFR3BQ9Y2G0 817 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 SNCAIPQ9Y6H5 919 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 SIP14410 1827 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 FAM189A1O60320 539 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 WFS1O76024 890 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 RNF8O76064 485 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 CD48P09326 243 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 NEFHP12036 1026 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 LAMTOR4Q0VGL1 99 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 ORC1Q13415 861 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 TAF1BQ53T94 588 aaPredicted RBP11.22□□□□□ -0.61
PSPC1-207ENST00000635251 ADGRD1Q6QNK2 874 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 EEPD1Q7L9B9 569 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 NLRP9Q7RTR0 991 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 LONP2Q86WA8 852 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 CCDC125Q86Z20 511 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 UNC45BQ8IWX7 931 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 KIRREL3Q8IZU9 778 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 LRRC71Q8N4P6 559 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 FAM71DQ8N9W8 422 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 CHST13Q8NET6 341 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 TCP10LQ8TDR4 215 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 SEPT1Q8WYJ6 367 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 INPP5DQ92835 1189 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 UTP4Q969X6 686 aaKnown RBP11.22□□□□□ -0.61
PSPC1-207ENST00000635251 ZNF668Q96K58 619 aaPredicted RBP11.22□□□□□ -0.61
PSPC1-207ENST00000635251 CALN1Q9BXU9 219 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 ACSS3Q9H6R3 686 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 IKBKGQ9Y6K9 419 aa11.22□□□□□ -0.61
PSPC1-207ENST00000635251 TCRBV7S3A2A0A539 114 aa11.21□□□□□ -0.61
PSPC1-207ENST00000635251 MCF2LO15068 1137 aa11.21□□□□□ -0.61
PSPC1-207ENST00000635251 CBX6O95503 412 aa11.21□□□□□ -0.61
PSPC1-207ENST00000635251 MT-ND3P03897 115 aa11.21□□□□□ -0.61
PSPC1-207ENST00000635251 HOXC6P09630 235 aa11.21□□□□□ -0.61
PSPC1-207ENST00000635251 HIRAP54198 1017 aaPredicted RBP11.21□□□□□ -0.61
PSPC1-207ENST00000635251 PRKG1Q13976 671 aa11.21□□□□□ -0.61
PSPC1-207ENST00000635251 ZNF667Q5HYK9 610 aa11.21□□□□□ -0.61
PSPC1-207ENST00000635251 CDR2LQ86X02 465 aaPredicted RBP11.21□□□□□ -0.61
PSPC1-207ENST00000635251 ARFGAP1Q8N6T3 406 aa11.21□□□□□ -0.61
PSPC1-207ENST00000635251 KCNV2Q8TDN2 545 aa11.21□□□□□ -0.61
PSPC1-207ENST00000635251 PHACTR1Q9C0D0 580 aa11.21□□□□□ -0.61
PSPC1-207ENST00000635251 WDR35Q9P2L0 1181 aa11.21□□□□□ -0.61
PSPC1-207ENST00000635251 FETUBQ9UGM5 382 aa11.21□□□□□ -0.61
PSPC1-207ENST00000635251 CYTH4Q9UIA0 394 aa11.21□□□□□ -0.61
PSPC1-207ENST00000635251 DCTN4Q9UJW0 460 aa11.21□□□□□ -0.61
PSPC1-207ENST00000635251 CHMP2BQ9UQN3 213 aa11.21□□□□□ -0.61
PSPC1-207ENST00000635251 GOLGB1Q14789 3259 aaKnown RBP11.21□□□□□ -0.61
PSPC1-207ENST00000635251 TM9SF1O15321 606 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 PEX10O60683 326 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 TMEM63AO94886 807 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 RBP3P10745 1247 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 FGFR1P11362 822 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 CDH8P55286 799 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 SLC8A3P57103 927 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 RNASELQ05823 741 aaKnown RBP11.21□□□□□ -0.62
PSPC1-207ENST00000635251 OVGP1Q12889 678 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 MXD4Q14582 209 aaPredicted RBP11.21□□□□□ -0.62
PSPC1-207ENST00000635251 CRYMQ14894 314 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 ANGEL2Q5VTE6 544 aaKnown RBP11.21□□□□□ -0.62
PSPC1-207ENST00000635251 DARS2Q6PI48 645 aaKnown RBP11.21□□□□□ -0.62
PSPC1-207ENST00000635251 MPZL3Q6UWV2 235 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 KIAA0319LQ8IZA0 1049 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 ALKBH8Q96BT7 664 aaKnown RBP11.21□□□□□ -0.62
PSPC1-207ENST00000635251 MIEF2Q96C03 454 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 FAM167AQ96KS9 214 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 CPXM1Q96SM3 734 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 XYLT2Q9H1B5 865 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 LHX5Q9H2C1 402 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 C12orf65Q9H3J6 166 aaKnown RBP11.21□□□□□ -0.62
PSPC1-207ENST00000635251 ALG13Q9NP73 1137 aaKnown RBP11.21□□□□□ -0.62
PSPC1-207ENST00000635251 SLC17A7Q9P2U7 560 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 ZMYND8Q9ULU4 1186 aaPredicted RBP11.21□□□□□ -0.62
PSPC1-207ENST00000635251 AFG3L2Q9Y4W6 797 aa11.21□□□□□ -0.62
PSPC1-207ENST00000635251 TNS1Q9HBL0 1735 aaKnown RBP11.21□□□□□ -0.62
PSPC1-207ENST00000635251 IQANK1A0A1B0GTG1 560 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 INO80B-WBP1J3KQ70 363 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 SMAPO00193 183 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 LPXNO60711 386 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 ERBB2P04626 1255 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 DPYSL3Q14195 570 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 TAF5Q15542 800 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 LY6KQ17RY6 165 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 SLC45A4Q5BKX6 768 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 DALRD3Q5D0E6 543 aaKnown RBP11.2□□□□□ -0.62
PSPC1-207ENST00000635251 SYCP2LQ5T4T6 812 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 ATF7IP2Q5U623 682 aa11.2□□□□□ -0.62
PSPC1-207ENST00000635251 CDCA2Q69YH5 1023 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms