RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 UBN2Q6ZU65 1347 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 A0A1W2PQ27 194 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 A0A1W2PQ64 194 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 A0A1W2PQD8 194 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 XPO1O14980 1071 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 FANCGO15287 622 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PROM1O43490 865 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 GMFGO60234 142 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ANP32DO95626 131 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 CYP2A6P11509 494 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PDGFRAP16234 1089 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 TCP1P17987 556 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PMLP29590 882 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 CAPZA2P47755 286 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 GSK3AP49840 483 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 HNRNPMP52272 730 aaKnown RBP eCLIP4.05□□□□□ -1.763e-6■■■■□ 21.2
R3HDM1-220ENST00000628915 AP3B2Q13367 1082 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ARSIQ5FYB1 569 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 C1orf141Q5JVX7 400 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 RUFY4Q6ZNE9 571 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 MAMDC2Q7Z304 686 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 C12orf56Q8IXR9 622 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 OR8H3Q8N146 312 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 NATD1Q8N6N6 113 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 CPT1BQ92523 772 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ANKS1AQ92625 1134 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 LENG1Q96BZ8 264 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 AK8Q96MA6 479 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PLEKHF1Q96S99 279 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 CCT8L2Q96SF2 557 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 RMDN3Q96TC7 470 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 SLC29A1Q99808 456 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PHF20Q9BVI0 1012 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 EMILIN2Q9BXX0 1053 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 AZI2Q9H6S1 392 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 TRIM39Q9HCM9 518 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 TOPORSQ9NS56 1045 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PCMTD2Q9NV79 361 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 OBP2AQ9NY56 170 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 DCTN4Q9UJW0 460 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 VPS28Q9UK41 221 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ZMIZ1Q9ULJ6 1067 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 HEY1Q9Y5J3 304 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 SZT2Q5T011 3432 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 SLC12A8A0AV02 714 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 TMEM120BA0PK00 339 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 SERTM1A2A2V5 107 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 LRRC14BA6NHZ5 514 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 DDX39AO00148 427 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 CAPN9O14815 690 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 GPR37O15354 613 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 MAN1A2O60476 641 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 CIDEAO60543 219 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PIAS2O75928 621 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 SCAF4O95104 1147 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PIGNO95427 931 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 GSTA1P08263 222 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 VAV1P15498 845 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ALOX12P18054 663 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ALDH4A1P30038 563 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PIN1Q13526 163 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 EZH2Q15910 746 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 TRIM71Q2Q1W2 868 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 TMEM132EQ6IEE7 984 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PHLDB3Q6NSJ2 640 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 GPR153Q6NV75 609 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 BLOC1S2Q6QNY1 142 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 C1orf122Q6ZSJ8 110 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 TRIM67Q6ZTA4 783 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 RFPL4BQ6ZWI9 263 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 CACNA2D4Q7Z3S7 1137 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 LUZP2Q86TE4 346 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 FAM160B2Q86V87 743 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 BBS7Q8IWZ6 715 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 NRSN1Q8IZ57 195 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PLPP7Q8NBV4 271 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 HUS1BQ8NHY5 278 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 RAB3IL1Q8TBN0 382 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 CCDC51Q96ER9 411 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 MYD88Q99836 296 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 MENTQ9BUN1 341 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 C9orf16Q9BUW7 83 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 GBA3Q9H227 469 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ZNF408Q9H9D4 720 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 IL1RAPL2Q9NP60 686 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 FNIP2Q9P278 1114 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ADAMTS1Q9UHI8 967 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ADGRE2Q9UHX3 823 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 AGAP1Q9UPQ3 857 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ARL2BPQ9Y2Y0 163 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 RBMX2Q9Y388 322 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PCDHB12Q9Y5F1 795 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ATP10DQ9P241 1426 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PTPDC1A2A3K4 754 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 A6NHS1 94 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 NUTM2BA6NNL0 878 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 NUTM2EB1AL46 878 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 FAM47E-STBD1D6RA91 191 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 E7ENQ6 273 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms