RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 KCTD10Q9H3F6 313 aa13.94□□□□□ -0.18
ATRX-208ENST00000622960 MTF2Q9Y483 593 aaPredicted RBP13.94□□□□□ -0.18
ATRX-208ENST00000622960 PATJQ8NI35 1801 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 IKBKBO14920 756 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 MAPK13O15264 365 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 HCRTO43612 131 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 ATP2C2O75185 946 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 SMC2O95347 1197 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 LMNAP02545 664 aaKnown RBP13.93□□□□□ -0.18
ATRX-208ENST00000622960 F11P03951 625 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 PTPN1P18031 435 aaKnown RBP13.93□□□□□ -0.18
ATRX-208ENST00000622960 PPP3CCP48454 512 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 CCR3P51677 355 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 NRLP54845 237 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 CSTF1Q05048 431 aaKnown RBP13.93□□□□□ -0.18
ATRX-208ENST00000622960 DPYDQ12882 1025 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 SGSM1Q2NKQ1 1148 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 TDRD10Q5VZ19 366 aaKnown RBP13.93□□□□□ -0.18
ATRX-208ENST00000622960 TXNDC8Q6A555 127 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 SCARA5Q6ZMJ2 495 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 LIMS2Q7Z4I7 341 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 GUF1Q8N442 669 aaKnown RBP13.93□□□□□ -0.18
ATRX-208ENST00000622960 B3GALNT2Q8NCR0 500 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 ATRIPQ8WXE1 791 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 PCED1BQ96HM7 432 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 MYRFLQ96LU7 910 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 SLITRK1Q96PX8 696 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 MRPL45Q9BRJ2 306 aaKnown RBP13.93□□□□□ -0.18
ATRX-208ENST00000622960 SMG9Q9H0W8 520 aaKnown RBP13.93□□□□□ -0.18
ATRX-208ENST00000622960 VRTNQ9H8Y1 702 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 GDPD2Q9HCC8 539 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 CRTAC1Q9NQ79 661 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 TRPM5Q9NZQ8 1165 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 TRAF3IP3Q9Y228 551 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 R4GN57 208 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 COL4A2P08572 1712 aa13.93□□□□□ -0.18
ATRX-208ENST00000622960 COL4A3Q01955 1670 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 SPECC1L-ADORA2AF8WAN1 911 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 PFKLP17858 780 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 CTHP32929 405 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 IFNAR2P48551 515 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 VAMP7P51809 220 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 FAM160A1Q05DH4 1040 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 ZNF268Q14587 947 aaPredicted RBP13.92□□□□□ -0.18
ATRX-208ENST00000622960 PDGFRLQ15198 375 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 DGKKQ5KSL6 1271 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 ASCL5Q7RTU5 278 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 FAM186BQ8IYM0 893 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 CPA6Q8N4T0 437 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 STKLD1Q8NE28 680 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 TTC8Q8TAM2 541 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 SECISBP2LQ93073 1101 aaKnown RBP13.92□□□□□ -0.18
ATRX-208ENST00000622960 RSPRY1Q96DX4 576 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 CHAMP1Q96JM3 812 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 ZFYVE19Q96K21 471 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 C8orf48Q96LL4 319 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 TSG101Q99816 390 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 FAM126AQ9BYI3 521 aaPredicted RBP13.92□□□□□ -0.18
ATRX-208ENST00000622960 CHRDQ9H2X0 955 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 GOLPH3LQ9H4A5 285 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 LMAN1LQ9HAT1 526 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 DMAC2Q9NW81 257 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 GTSE1Q9NYZ3 720 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 MAPK8IP1Q9UQF2 711 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 PCDHGA2Q9Y5H1 932 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 WDFY4Q6ZS81 3184 aa13.92□□□□□ -0.18
ATRX-208ENST00000622960 NCANO14594 1321 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 F8VP50 259 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 ARNTLO00327 626 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 STX10O60499 249 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 RTN3O95197 1032 aaPredicted RBP13.91□□□□□ -0.18
ATRX-208ENST00000622960 ABL1P00519 1130 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 PSMC2P35998 433 aaKnown RBP13.91□□□□□ -0.18
ATRX-208ENST00000622960 CLDN10P78369 228 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 STIM1Q13586 685 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 NFIL3Q16649 462 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 CCDC142Q17RM4 750 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 SCARA3Q6AZY7 606 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 PDZD8Q8NEN9 1154 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 ZNF516Q92618 1163 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 USP13Q92995 863 aaPredicted RBP13.91□□□□□ -0.18
ATRX-208ENST00000622960 ATP2A3Q93084 1043 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 XYLT2Q9H1B5 865 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 SMYD3Q9H7B4 428 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 GKN1Q9NS71 199 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 OBSL1O75147 1896 aa13.91□□□□□ -0.18
ATRX-208ENST00000622960 C4BPAP04003 597 aaKnown RBP13.9□□□□□ -0.18
ATRX-208ENST00000622960 EPB41P11171 864 aaKnown RBP13.9□□□□□ -0.18
ATRX-208ENST00000622960 HDCP19113 662 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 SOX9P48436 509 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 NOP14P78316 857 aaKnown RBP13.9□□□□□ -0.18
ATRX-208ENST00000622960 ENPEPQ07075 957 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 GRSF1Q12849 480 aaKnown RBP eCLIP13.9□□□□□ -0.18
ATRX-208ENST00000622960 IFRD2Q12894 506 aaPredicted RBP13.9□□□□□ -0.18
ATRX-208ENST00000622960 MTAPQ13126 283 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 NR1H3Q13133 447 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 ADAM9Q13443 819 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 RUNX3Q13761 415 aa13.9□□□□□ -0.18
ATRX-208ENST00000622960 MTF1Q14872 753 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms