RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 FOXO6A8MYZ6 492 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 DGKIO75912 1065 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 ASNSP08243 561 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 CHKAP35790 457 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 GRIA2P42262 883 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 PPIDQ08752 370 aaKnown RBP13.04□□□□□ -0.32
LITAF-221ENST00000622633 PGM5Q15124 567 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 CNGA2Q16280 664 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 ANO5Q75V66 913 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 ANKRD13BQ86YJ7 626 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 LRRC49Q8IUZ0 686 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 MAP4K3Q8IVH8 894 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 ZBED8Q8IZ13 594 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 MFSD14AQ96MC6 490 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 CDC42EP4Q9H3Q1 356 aaKnown RBP13.04□□□□□ -0.32
LITAF-221ENST00000622633 PLSCR1O15162 318 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 LMNAP02545 664 aaKnown RBP13.04□□□□□ -0.32
LITAF-221ENST00000622633 CREB1P16220 341 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 GTF2H1P32780 548 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 IGBP1P78318 339 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 MGAT5Q09328 741 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 LRRC14Q15048 493 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 KHDC1Q4VXA5 237 aaKnown RBP13.04□□□□□ -0.32
LITAF-221ENST00000622633 TNFAIP8L3Q5GJ75 292 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 CCSAPQ6IQ19 270 aaPredicted RBP13.04□□□□□ -0.32
LITAF-221ENST00000622633 CROCCP2Q86T23 111 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 RIN3Q8TB24 985 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 MGARPQ8TDB4 240 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 CPA5Q8WXQ8 436 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 RMDN3Q96TC7 470 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 ZNF277Q9NRM2 450 aaPredicted RBP13.04□□□□□ -0.32
LITAF-221ENST00000622633 METTL5Q9NRN9 209 aaKnown RBP13.04□□□□□ -0.32
LITAF-221ENST00000622633 ANKEF1Q9NU02 776 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 HOXC10Q9NYD6 342 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 PRKAG3Q9UGI9 489 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 ARL2BPQ9Y2Y0 163 aa13.04□□□□□ -0.32
LITAF-221ENST00000622633 CCDC162PA2VCL2 907 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 WDR64B1ANS9 1081 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 E9PBE3 544 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 ENPP1P22413 925 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 RGS2P41220 211 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 NEK3P51956 506 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 CYP24A1Q07973 514 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 CCDC6Q16204 474 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 LRRC74BQ6ZQY2 392 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 TRMT10CQ7L0Y3 403 aaKnown RBP13.03□□□□□ -0.32
LITAF-221ENST00000622633 BBS5Q8N3I7 341 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 LARGE2Q8N3Y3 721 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 PPFIBP2Q8ND30 876 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 TMC2Q8TDI7 906 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 PWWP2AQ96N64 755 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 STMN4Q9H169 189 aaPredicted RBP13.03□□□□□ -0.32
LITAF-221ENST00000622633 WHRNQ9P202 907 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 MATN2O00339 956 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 HGSO14964 777 aaPredicted RBP13.03□□□□□ -0.32
LITAF-221ENST00000622633 RRM1P23921 792 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 ACADVLP49748 655 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 VPS41P49754 854 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 JAK3P52333 1124 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 MCCD1P59942 119 aaPredicted RBP13.03□□□□□ -0.32
LITAF-221ENST00000622633 SPIDRQ14159 915 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 ADRM1Q16186 407 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 ZNF568Q3ZCX4 644 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 METTL21CQ5VZV1 264 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 LMBRD2Q68DH5 695 aaPredicted RBP13.03□□□□□ -0.32
LITAF-221ENST00000622633 MCOLN2Q8IZK6 566 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 TTC39CQ8N584 583 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 CEP170P1Q96L14 293 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 TMEM237Q96Q45 408 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 FAM213AQ9BRX8 229 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 HEMGNQ9BXL5 484 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 TIMMDC1Q9NPL8 285 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 GINM1Q9NU53 330 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 FGFR1OP2Q9NVK5 253 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 DDX18Q9NVP1 670 aaKnown RBP13.03□□□□□ -0.32
LITAF-221ENST00000622633 GIT1Q9Y2X7 761 aa13.03□□□□□ -0.32
LITAF-221ENST00000622633 FBXO21O94952 628 aa13.02□□□□□ -0.32
LITAF-221ENST00000622633 CYP2C9P11712 490 aa13.02□□□□□ -0.32
LITAF-221ENST00000622633 TKTP29401 623 aaKnown RBP13.02□□□□□ -0.32
LITAF-221ENST00000622633 TMED10P49755 219 aaKnown RBP13.02□□□□□ -0.32
LITAF-221ENST00000622633 CSE1LP55060 971 aaKnown RBP13.02□□□□□ -0.32
LITAF-221ENST00000622633 PFKPQ01813 784 aa13.02□□□□□ -0.32
LITAF-221ENST00000622633 ARHGEF16Q5VV41 709 aa13.02□□□□□ -0.32
LITAF-221ENST00000622633 MFSD5Q6N075 450 aa13.02□□□□□ -0.32
LITAF-221ENST00000622633 RHBDF2Q6PJF5 856 aa13.02□□□□□ -0.32
LITAF-221ENST00000622633 ZNF516Q92618 1163 aa13.02□□□□□ -0.32
LITAF-221ENST00000622633 FBXL18Q96ME1 805 aa13.02□□□□□ -0.32
LITAF-221ENST00000622633 ZNF184Q99676 751 aaPredicted RBP13.02□□□□□ -0.32
LITAF-221ENST00000622633 FAM118BQ9BPY3 351 aa13.02□□□□□ -0.32
LITAF-221ENST00000622633 TBC1D10AQ9BXI6 508 aa13.02□□□□□ -0.32
LITAF-221ENST00000622633 ROPN1BQ9BZX4 212 aaPredicted RBP13.02□□□□□ -0.32
LITAF-221ENST00000622633 ROPN1Q9HAT0 212 aaPredicted RBP13.02□□□□□ -0.32
LITAF-221ENST00000622633 SLC38A10Q9HBR0 1119 aa13.02□□□□□ -0.32
LITAF-221ENST00000622633 KRT82Q9NSB4 513 aa13.02□□□□□ -0.32
LITAF-221ENST00000622633 TELO2Q9Y4R8 837 aa13.02□□□□□ -0.32
LITAF-221ENST00000622633 TRIM17Q9Y577 477 aa13.02□□□□□ -0.32
LITAF-221ENST00000622633 GPC6Q9Y625 555 aaPredicted RBP13.02□□□□□ -0.32
LITAF-221ENST00000622633 ADGRA3Q8IWK6 1321 aa13.02□□□□□ -0.32
LITAF-221ENST00000622633 SMIM31A0A1B0GVY4 71 aa13.02□□□□□ -0.33
LITAF-221ENST00000622633 TRIM64CA6NLI5 447 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms