RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 MACROD1Q9BQ69 325 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 DUSP22Q9NRW4 184 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 SH3BP4Q9P0V3 963 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 SH2B3Q9UQQ2 575 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 TBC1D30Q9Y2I9 924 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 USP19O94966 1318 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 DNAJC9-AS1A6NH13 148 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 LINC01548A6NM66 108 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 S100BP04271 92 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-229ENST00000621897 SLC7A1P30825 629 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 ABCG1P45844 678 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 PDE1AP54750 535 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 EEFSECP57772 596 aaKnown RBP5.49□□□□□ -1.53
BRCA1-229ENST00000621897 GPSM2P81274 684 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 KRT17Q04695 432 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 KRTAP1-1Q07627 177 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 SLC13A2Q13183 592 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 AARS2Q5JTZ9 985 aaKnown RBP5.49□□□□□ -1.53
BRCA1-229ENST00000621897 LMBRD2Q68DH5 695 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-229ENST00000621897 MAEAQ7L5Y9 396 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 GAS2L3Q86XJ1 694 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 SLC15A3Q8IY34 581 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 CHPFQ8IZ52 775 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 LRRC71Q8N4P6 559 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 OR6B3Q8NGW1 331 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 RAPGEF4Q8WZA2 1011 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 TBC1D5Q92609 795 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 ANKS1AQ92625 1134 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 C22orf23Q9BZE7 217 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 MS4A7Q9GZW8 240 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-229ENST00000621897 TMEM60Q9H2L4 133 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 EID1Q9Y6B2 187 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 FER1L4A9Z1Z3 1794 aa5.49□□□□□ -1.53
BRCA1-229ENST00000621897 QSOX1O00391 747 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 TBX3O15119 743 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 VNN1O95497 513 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 ONECUT2O95948 504 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 CYP2C9P11712 490 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 EN2P19622 333 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-229ENST00000621897 KCNA3P22001 575 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 PDE6CP51160 858 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 DGKEP52429 567 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 CYP4F2P78329 520 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 PPP2R5AQ15172 486 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 LLGL1Q15334 1064 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 LY6KQ17RY6 165 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 PROSER3Q2NL68 480 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 PLA1AQ53H76 456 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 PCID2Q5JVF3 399 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 SUMO4Q6EEV6 95 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 NAPRTQ6XQN6 538 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 SLC29A4Q7RTT9 530 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 WDR53Q7Z5U6 358 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-229ENST00000621897 KIAA0319LQ8IZA0 1049 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 MPP5Q8N3R9 675 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 FANCBQ8NB91 859 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 SEMA6DQ8NFY4 1073 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 XAGE5Q8WWM1 108 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 FSD1LQ9BXM9 530 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 STK32BQ9NY57 414 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 SNX14Q9Y5W7 946 aa5.48□□□□□ -1.53
BRCA1-229ENST00000621897 CAPN8A6NHC0 703 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 INO80B-WBP1J3KQ70 363 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 MYO1FO00160 1098 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 JTBO76095 146 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 CELA2AP08217 269 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 CTGFP29279 349 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 HNRNPA0Q13151 305 aaKnown RBP5.47□□□□□ -1.53
BRCA1-229ENST00000621897 CNN3Q15417 329 aaKnown RBP5.47□□□□□ -1.53
BRCA1-229ENST00000621897 MGAT5BQ3V5L5 792 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 DCAF12L1Q5VU92 463 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 NXNQ6DKJ4 435 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 APOA5Q6Q788 366 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 ZDHHC24Q6UX98 284 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 ZNF66Q6ZN08 573 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 Q6ZWC4 215 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 TCEAL8Q8IYN2 117 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 ABRAQ8N0Z2 381 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 MAGEB6Q8N7X4 407 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 OR56A3Q8NH54 315 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 BPIFB1Q8TDL5 484 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 TMEM171Q8WVE6 324 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 OSCP1Q8WVF1 389 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 SOCS4Q8WXH5 440 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 JDP2Q8WYK2 163 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 INO80BQ9C086 356 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-229ENST00000621897 CPNE7Q9UBL6 633 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 DDX20Q9UHI6 824 aaKnown RBP5.47□□□□□ -1.53
BRCA1-229ENST00000621897 ADAMTS5Q9UNA0 930 aa5.47□□□□□ -1.53
BRCA1-229ENST00000621897 SHROOM4Q9ULL8 1493 aa5.46□□□□□ -1.53
BRCA1-229ENST00000621897 TISP43B9A030 160 aa5.46□□□□□ -1.54
BRCA1-229ENST00000621897 FAM227AF5H4B4 570 aa5.46□□□□□ -1.54
BRCA1-229ENST00000621897 SMIM22K7EJ46 135 aa5.46□□□□□ -1.54
BRCA1-229ENST00000621897 TBC1D4O60343 1298 aa5.46□□□□□ -1.54
BRCA1-229ENST00000621897 LATS1O95835 1130 aa5.46□□□□□ -1.54
BRCA1-229ENST00000621897 XRCC6P12956 609 aaKnown RBP eCLIP5.46□□□□□ -1.54
BRCA1-229ENST00000621897 PTCHD3Q3KNS1 767 aa5.46□□□□□ -1.54
BRCA1-229ENST00000621897 MINDY4Q4G0A6 757 aa5.46□□□□□ -1.54
BRCA1-229ENST00000621897 SLC9A4Q6AI14 798 aa5.46□□□□□ -1.54
BRCA1-229ENST00000621897 DPY19L3Q6ZPD9 716 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms