RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 EHHADHQ08426 723 aa12.27□□□□□ -0.45
CPNE3-210ENST00000621245 ALCAMQ13740 583 aa12.27□□□□□ -0.45
CPNE3-210ENST00000621245 ARSIQ5FYB1 569 aa12.27□□□□□ -0.45
CPNE3-210ENST00000621245 FSTL4Q6MZW2 842 aa12.27□□□□□ -0.45
CPNE3-210ENST00000621245 RALGPS2Q86X27 583 aaPredicted RBP12.27□□□□□ -0.45
CPNE3-210ENST00000621245 NELFCDQ8IXH7 590 aa12.27□□□□□ -0.45
CPNE3-210ENST00000621245 RDH13Q8NBN7 331 aa12.27□□□□□ -0.45
CPNE3-210ENST00000621245 PLEKHO2Q8TD55 490 aa12.27□□□□□ -0.45
CPNE3-210ENST00000621245 LEO1Q8WVC0 666 aaPredicted RBP12.27□□□□□ -0.45
CPNE3-210ENST00000621245 SCFD1Q8WVM8 642 aa12.27□□□□□ -0.45
CPNE3-210ENST00000621245 EZH1Q92800 747 aaPredicted RBP12.27□□□□□ -0.45
CPNE3-210ENST00000621245 GCNAQ96QF7 691 aa12.27□□□□□ -0.45
CPNE3-210ENST00000621245 CYP2S1Q96SQ9 504 aa12.27□□□□□ -0.45
CPNE3-210ENST00000621245 FAM83CQ9BQN1 747 aa12.27□□□□□ -0.45
CPNE3-210ENST00000621245 ACBD6Q9BR61 282 aa12.27□□□□□ -0.45
CPNE3-210ENST00000621245 MRPL45Q9BRJ2 306 aaKnown RBP12.27□□□□□ -0.45
CPNE3-210ENST00000621245 C8orf33Q9H7E9 229 aaPredicted RBP12.27□□□□□ -0.45
CPNE3-210ENST00000621245 AGPAT3Q9NRZ7 376 aa12.27□□□□□ -0.45
CPNE3-210ENST00000621245 OBP2AQ9NY56 170 aa12.27□□□□□ -0.45
CPNE3-210ENST00000621245 CHD8Q9HCK8 2581 aa12.27□□□□□ -0.45
CPNE3-210ENST00000621245 SPEGQ15772 3267 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 C2orf78A6NCI8 922 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 LDHAP00338 332 aaKnown RBP12.26□□□□□ -0.45
CPNE3-210ENST00000621245 CST3P01034 146 aaPredicted RBP12.26□□□□□ -0.45
CPNE3-210ENST00000621245 EGFP01133 1207 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 HOXB3P14651 431 aaPredicted RBP12.26□□□□□ -0.45
CPNE3-210ENST00000621245 CXCL12P48061 93 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 PXNP49023 591 aaPredicted RBP12.26□□□□□ -0.45
CPNE3-210ENST00000621245 CASP4P49662 377 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 CYP2J2P51589 502 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 CCR3P51677 355 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 MLLT6P55198 1093 aaPredicted RBP12.26□□□□□ -0.45
CPNE3-210ENST00000621245 RBP5P82980 135 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 ZXDBP98169 803 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 CUL4BQ13620 913 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 TAF12Q16514 161 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 ITPRIPL2Q3MIP1 535 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 FAM26FQ5R3K3 315 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 FAM171BQ6P995 826 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 MAMSTRQ6ZN01 415 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 SCN4BQ8IWT1 228 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 SPEM1Q8N4L4 309 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 TOP6BLQ8N6T0 577 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 CELF5Q8N6W0 485 aaKnown RBP12.26□□□□□ -0.45
CPNE3-210ENST00000621245 TTC16Q8NEE8 873 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 ZNF507Q8TCN5 953 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 ZNF516Q92618 1163 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 HPDLQ96IR7 371 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 SYT15Q9BQS2 421 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 DPEP3Q9H4B8 488 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 TMEM206Q9H813 350 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 TRPC7Q9HCX4 862 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 DLL3Q9NYJ7 618 aa12.26□□□□□ -0.45
CPNE3-210ENST00000621245 NUP205Q92621 2012 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 POLR2DO15514 142 aaKnown RBP12.25□□□□□ -0.45
CPNE3-210ENST00000621245 CUTAO60888 179 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 PDGFRBP09619 1106 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 DLATP10515 647 aaKnown RBP12.25□□□□□ -0.45
CPNE3-210ENST00000621245 MYL7Q01449 175 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 SPEM2Q0P670 501 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 USP4Q13107 963 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 LRRC32Q14392 662 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 ZNF77Q15935 545 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 SNRNP35Q16560 246 aaKnown RBP12.25□□□□□ -0.45
CPNE3-210ENST00000621245 NFE2Q16621 373 aaPredicted RBP12.25□□□□□ -0.45
CPNE3-210ENST00000621245 PRR23BQ6ZRT6 265 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 ERMP1Q7Z2K6 904 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 TRAPPC11Q7Z392 1133 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 DGLUCYQ7Z3D6 616 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 MON1AQ86VX9 555 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 SPATA2LQ8IUW3 424 aaPredicted RBP12.25□□□□□ -0.45
CPNE3-210ENST00000621245 TMEM86AQ8N2M4 240 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 CACTINQ8WUQ7 758 aaKnown RBP12.25□□□□□ -0.45
CPNE3-210ENST00000621245 TRMT2BQ96GJ1 504 aaKnown RBP12.25□□□□□ -0.45
CPNE3-210ENST00000621245 MSANTD3Q96H12 275 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 POM121Q96HA1 1249 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 ANKRD36BP1Q96IX9 119 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 C7orf25Q9BPX7 421 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 IER2Q9BTL4 223 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 ABCB6Q9NP58 842 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 TDP1Q9NUW8 608 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 GCNT4Q9P109 453 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 WNT6Q9Y6F9 365 aa12.25□□□□□ -0.45
CPNE3-210ENST00000621245 KMT2BQ9UMN6 2715 aaPredicted RBP12.25□□□□□ -0.45
CPNE3-210ENST00000621245 ZNF233A6NK53 670 aa12.24□□□□□ -0.45
CPNE3-210ENST00000621245 SCAMP3O14828 347 aaKnown RBP12.24□□□□□ -0.45
CPNE3-210ENST00000621245 EIF3DO15371 548 aaKnown RBP eCLIP12.24□□□□□ -0.45
CPNE3-210ENST00000621245 PAPSS2O95340 614 aaPredicted RBP12.24□□□□□ -0.45
CPNE3-210ENST00000621245 YEATS4O95619 227 aa12.24□□□□□ -0.45
CPNE3-210ENST00000621245 F13A1P00488 732 aa12.24□□□□□ -0.45
CPNE3-210ENST00000621245 TNNC2P02585 160 aa12.24□□□□□ -0.45
CPNE3-210ENST00000621245 CSH1P0DML2 217 aa12.24□□□□□ -0.45
CPNE3-210ENST00000621245 CSH2P0DML3 217 aa12.24□□□□□ -0.45
CPNE3-210ENST00000621245 ZSCAN22P10073 491 aaPredicted RBP12.24□□□□□ -0.45
CPNE3-210ENST00000621245 WARSP23381 471 aaKnown RBP12.24□□□□□ -0.45
CPNE3-210ENST00000621245 BDNFP23560 247 aa12.24□□□□□ -0.45
CPNE3-210ENST00000621245 AVPR1AP37288 418 aa12.24□□□□□ -0.45
CPNE3-210ENST00000621245 CYP24A1Q07973 514 aa12.24□□□□□ -0.45
CPNE3-210ENST00000621245 SMARCB1Q12824 385 aa12.24□□□□□ -0.45
CPNE3-210ENST00000621245 RUNX3Q13761 415 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms