RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SCYL3Q8IZE3 742 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 TAB3Q8N5C8 712 aaPredicted RBP20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 NIPA2Q8N8Q9 360 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 APOPT1Q96IL0 206 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 GINM1Q9NU53 330 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 PSME4Q14997 1843 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 YDJCA8MPS7 323 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 ESRRAP11474 423 aaPredicted RBP20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 FAM91A1Q658Y4 838 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 CWF19L1Q69YN2 538 aaKnown RBP20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 SH2D5Q6ZV89 423 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 NLGN1Q8N2Q7 840 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 PHC3Q8NDX5 983 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 OR5B17Q8NGF7 314 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 DTX3LQ8TDB6 740 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 OXNAD1Q96HP4 312 aaPredicted RBP20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 ZBTB45Q96K62 511 aaPredicted RBP20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 FAM111AQ96PZ2 611 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 CGRRF1Q99675 332 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 MAP3K20Q9NYL2 800 aaKnown RBP20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 C2CD2Q9Y426 696 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 TELO2Q9Y4R8 837 aa20.51■□□□□ 0.87
PDLIM3-212ENST00000620787 FCHO1O14526 889 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 SNUPNO95149 360 aaKnown RBP20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 IL1BP01584 269 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 SLC18A2Q05940 514 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 AP1ARQ63HQ0 302 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 CCDC62Q6P9F0 684 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 CNTN3Q9P232 1028 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 SCOCQ9UIL1 159 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 H0YCG3 227 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 LSM8O95777 96 aaKnown RBP20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 TSHRP16473 764 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 PTK7Q13308 1070 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 POLNQ7Z5Q5 900 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 ZC3H18Q86VM9 953 aaKnown RBP20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 IGDCC3Q8IVU1 814 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 MFN1Q8IWA4 741 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 TTC17Q96AE7 1141 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 ZNF341Q9BYN7 854 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 SEPT9Q9UHD8 586 aaPredicted RBP20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 STRIP2Q9ULQ0 834 aa20.5■□□□□ 0.87
PDLIM3-212ENST00000620787 MYL2P10916 166 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 BRD2P25440 801 aaKnown RBP20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 SLC25A11Q02978 314 aaKnown RBP20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 KBTBD2Q8IY47 623 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 STMN2Q93045 179 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 ATP6V0A1Q93050 837 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 GJD4Q96KN9 370 aaPredicted RBP20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 CYTH2Q99418 400 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 SLC38A10Q9HBR0 1119 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 CYP26B1Q9NR63 512 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 ZNF212Q9UDV6 495 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 XPO7Q9UIA9 1087 aaKnown RBP20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 AGTPBP1Q9UPW5 1226 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 CHMP2BQ9UQN3 213 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 EFR3BQ9Y2G0 817 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 CNTNAP2Q9UHC6 1331 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 IQANK1A0A1B0GTG1 560 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 TBC1D12O60347 775 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 CST8O60676 142 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 ROR2Q01974 943 aaKnown RBP20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 TAP1Q03518 808 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 NCOA4Q13772 614 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 CYP4A22Q5TCH4 519 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 FOXB2Q5VYV0 432 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 BBS12Q6ZW61 710 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 UNC45BQ8IWX7 931 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 PDIK1LQ8N165 341 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 GALNT15Q8N3T1 639 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 RSAD2Q8WXG1 361 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 FRMD8P1Q9BZ68 369 aaPredicted RBP20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 NMUR2Q9GZQ4 415 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 KRT82Q9NSB4 513 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 POLIQ9UNA4 740 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 WASF2Q9Y6W5 498 aa20.49■□□□□ 0.87
PDLIM3-212ENST00000620787 E5RJQ4 531 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 FAAP100Q0VG06 881 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 THOC5Q13769 683 aaKnown RBP20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 SMTNL2Q2TAL5 461 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 ARHGEF16Q5VV41 709 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 SWSAP1Q6NVH7 229 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 WDTC1Q8N5D0 677 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 PDCD7Q8N8D1 485 aaKnown RBP20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 SLC44A1Q8WWI5 657 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 GATA6Q92908 595 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 TMEM39BQ9GZU3 492 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 ZWILCHQ9H900 591 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 ARMCX1Q9P291 453 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 WDR35Q9P2L0 1181 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 A8MXQ7 604 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 PYGBP11216 843 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 AMPD1P23109 780 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 IL1R2P27930 398 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 PGM1P36871 562 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 RAP1GDS1P52306 607 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 PRKCEQ02156 737 aa20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 RBBP5Q15291 538 aaKnown RBP20.48■□□□□ 0.87
PDLIM3-212ENST00000620787 ZRSR2Q15696 482 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms