RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ZNF12P17014 697 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 TBXAS1P24557 533 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-208ENST00000618395 MPP2Q14168 576 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 TDRD5Q8NAT2 981 aaKnown RBP15.56■□□□□ 0.08
COL5A1-208ENST00000618395 USP38Q8NB14 1042 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 PJA1Q8NG27 643 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 CHURC1Q8WUH1 139 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 PTPRN2Q92932 1015 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 HPS4Q9NQG7 708 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 RAP1GAPP47736 663 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 COPZ1P61923 177 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 DENND5AQ6IQ26 1287 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 ANKRD26P1Q6NSI1 321 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 JAMLQ86YT9 394 aa15.56■□□□□ 0.08
COL5A1-208ENST00000618395 PIH1D3Q9NQM4 214 aaKnown RBP15.56■□□□□ 0.08
COL5A1-208ENST00000618395 SLC26A3P40879 764 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 OTUD3Q5T2D3 398 aaPredicted RBP15.55■□□□□ 0.08
COL5A1-208ENST00000618395 THRAP3Q9Y2W1 955 aaKnown RBP15.55■□□□□ 0.08
COL5A1-208ENST00000618395 UGGT2Q9NYU1 1516 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 BIVM-ERCC5R4GMW8 1640 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 RIMBP2O15034 1052 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 KATNA1O75449 491 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 ABL2P42684 1182 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 TOP3AQ13472 1001 aaPredicted RBP15.55■□□□□ 0.08
COL5A1-208ENST00000618395 OSCP1Q8WVF1 389 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 VPS33AQ96AX1 596 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 HEATR9A2RTY3 570 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 TMCC2O75069 709 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 ADSLP30566 484 aaPredicted RBP15.55■□□□□ 0.08
COL5A1-208ENST00000618395 ZAP70P43403 619 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 SLC9A3P48764 834 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 DRAP1Q14919 205 aaPredicted RBP15.55■□□□□ 0.08
COL5A1-208ENST00000618395 FAM111AQ96PZ2 611 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 METTL23Q86XA0 190 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 PM20D2Q8IYS1 436 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 KRT35Q92764 455 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 CHP1Q99653 195 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 NOS1P29475 1434 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 F5H423 210 aaPredicted RBP15.55■□□□□ 0.08
COL5A1-208ENST00000618395 CCDC126Q96EE4 140 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 ACEP12821 1306 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 MYL12BO14950 172 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 TEX33O43247 280 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 MAPK10P53779 464 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 TMEM26Q6ZUK4 368 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 TTC30AQ86WT1 665 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 SLC35G2Q8TBE7 412 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 KLHL1Q9NR64 748 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 CHP2O43745 196 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 PSMG1O95456 288 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 HIBADHP31937 336 aaKnown RBP15.55■□□□□ 0.08
COL5A1-208ENST00000618395 OTOAQ7RTW8 1153 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 ZBTB38Q8NAP3 1195 aaPredicted RBP15.55■□□□□ 0.08
COL5A1-208ENST00000618395 ASB12Q8WXK4 309 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 SH3BP4Q9P0V3 963 aa15.55■□□□□ 0.08
COL5A1-208ENST00000618395 PPIP5K1Q6PFW1 1433 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 RPS6KA5O75582 802 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 PRIM2P49643 509 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 USP10Q14694 798 aaKnown RBP15.54■□□□□ 0.08
COL5A1-208ENST00000618395 SLC7A3Q8WY07 619 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 RAB6BQ9NRW1 208 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 RUVBL2Q9Y230 463 aaKnown RBP15.54■□□□□ 0.08
COL5A1-208ENST00000618395 PCDHB6Q9Y5E3 794 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 PRPF3O43395 683 aaKnown RBP15.54■□□□□ 0.08
COL5A1-208ENST00000618395 GP5P40197 560 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 AQP5P55064 265 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 MAPK6Q16659 721 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 KBTBD8Q8NFY9 601 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 ZNF577Q9BSK1 485 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 ATXN8OSP0DMR3 200 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 SMU1Q2TAY7 513 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 PDCD4Q53EL6 469 aaKnown RBP15.54■□□□□ 0.08
COL5A1-208ENST00000618395 FAM47CQ5HY64 1035 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 BHLHB9Q6PI77 547 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 ZDHHC13Q8IUH4 622 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 HTRA1Q92743 480 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 TBATAQ96M53 351 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 WDR11Q9BZH6 1224 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 SP140LQ9H930 580 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 POLBP06746 335 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 CENPAP49450 140 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 VAC14Q08AM6 782 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 ERO1BQ86YB8 467 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 ELMO2Q96JJ3 720 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 SNX8Q9Y5X2 465 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 HNMTP50135 292 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 NRF1Q16656 503 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 TTC23LQ6PF05 361 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 PHF11Q9UIL8 331 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 PIK3CDO00329 1044 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 DGCR6Q14129 220 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 SPIDRQ14159 915 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 LRRC24Q50LG9 513 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 FAM160B1Q5W0V3 765 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 WRNIP1Q96S55 665 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 FAM118BQ9BPY3 351 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 RAPGEFL1Q9UHV5 662 aa15.54■□□□□ 0.08
COL5A1-208ENST00000618395 TTLL13PA6NNM8 815 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 VAV1P15498 845 aa15.53■□□□□ 0.08
COL5A1-208ENST00000618395 RPS7P62081 194 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms