RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 FAM126AQ9BYI3 521 aaPredicted RBP23.27■■□□□ 1.32
CBWD1-223ENST00000613988 PVALEFA0A1B0GWK0 134 aa23.27■■□□□ 1.31
CBWD1-223ENST00000613988 MYBPHLA2RUH7 354 aa23.27■■□□□ 1.31
CBWD1-223ENST00000613988 GABRDO14764 452 aa23.27■■□□□ 1.31
CBWD1-223ENST00000613988 DDX6P26196 483 aaKnown RBP eCLIP23.27■■□□□ 1.31
CBWD1-223ENST00000613988 PCSK1P29120 753 aa23.27■■□□□ 1.31
CBWD1-223ENST00000613988 CCR3P51677 355 aa23.27■■□□□ 1.31
CBWD1-223ENST00000613988 LRRC32Q14392 662 aa23.27■■□□□ 1.31
CBWD1-223ENST00000613988 UNC13DQ70J99 1090 aa23.27■■□□□ 1.31
CBWD1-223ENST00000613988 SPATA2LQ8IUW3 424 aaPredicted RBP23.27■■□□□ 1.31
CBWD1-223ENST00000613988 DCLK2Q8N568 766 aa23.27■■□□□ 1.31
CBWD1-223ENST00000613988 STKLD1Q8NE28 680 aa23.27■■□□□ 1.31
CBWD1-223ENST00000613988 PKMYT1Q99640 499 aa23.27■■□□□ 1.31
CBWD1-223ENST00000613988 TGFB1I1O43294 461 aa23.26■■□□□ 1.31
CBWD1-223ENST00000613988 HCRTO43612 131 aa23.26■■□□□ 1.31
CBWD1-223ENST00000613988 LILRB5O75023 590 aa23.26■■□□□ 1.31
CBWD1-223ENST00000613988 BMP6P22004 513 aa23.26■■□□□ 1.31
CBWD1-223ENST00000613988 CASP1P29466 404 aa23.26■■□□□ 1.31
CBWD1-223ENST00000613988 CTHP32929 405 aa23.26■■□□□ 1.31
CBWD1-223ENST00000613988 NRLP54845 237 aa23.26■■□□□ 1.31
CBWD1-223ENST00000613988 TNK2Q07912 1038 aa23.26■■□□□ 1.31
CBWD1-223ENST00000613988 IQCB1Q15051 598 aa23.26■■□□□ 1.31
CBWD1-223ENST00000613988 TXNDC8Q6A555 127 aa23.26■■□□□ 1.31
CBWD1-223ENST00000613988 TXNDC11Q6PKC3 985 aa23.26■■□□□ 1.31
CBWD1-223ENST00000613988 WDR49Q8IV35 697 aa23.26■■□□□ 1.31
CBWD1-223ENST00000613988 MRPS31Q92665 395 aaKnown RBP23.26■■□□□ 1.31
CBWD1-223ENST00000613988 ANP32BQ92688 251 aaKnown RBP23.26■■□□□ 1.31
CBWD1-223ENST00000613988 AGPAT3Q9NRZ7 376 aa23.26■■□□□ 1.31
CBWD1-223ENST00000613988 DENND4CQ5VZ89 1909 aa23.25■■□□□ 1.31
CBWD1-223ENST00000613988 KLRC4O43908 158 aa23.25■■□□□ 1.31
CBWD1-223ENST00000613988 RHOBTB3O94955 611 aa23.25■■□□□ 1.31
CBWD1-223ENST00000613988 CXCL12P48061 93 aa23.25■■□□□ 1.31
CBWD1-223ENST00000613988 SNRNP35Q16560 246 aaKnown RBP23.25■■□□□ 1.31
CBWD1-223ENST00000613988 ZNF658Q5TYW1 1059 aaPredicted RBP23.25■■□□□ 1.31
CBWD1-223ENST00000613988 ISM2Q6H9L7 571 aa23.25■■□□□ 1.31
CBWD1-223ENST00000613988 NELFCDQ8IXH7 590 aa23.25■■□□□ 1.31
CBWD1-223ENST00000613988 SCFD1Q8WVM8 642 aa23.25■■□□□ 1.31
CBWD1-223ENST00000613988 GKN1Q9NS71 199 aa23.25■■□□□ 1.31
CBWD1-223ENST00000613988 RBM12Q9NTZ6 932 aaKnown RBP23.25■■□□□ 1.31
CBWD1-223ENST00000613988 NCDNQ9UBB6 729 aa23.25■■□□□ 1.31
CBWD1-223ENST00000613988 UXTQ9UBK9 157 aaPredicted RBP23.25■■□□□ 1.31
CBWD1-223ENST00000613988 DMXL1Q9Y485 3027 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 ZNF638Q14966 1978 aaKnown RBP23.24■■□□□ 1.31
CBWD1-223ENST00000613988 DCHS1Q96JQ0 3298 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 SOBPA7XYQ1 873 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 SMTNL1A8MU46 457 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 BECN2A8MW95 431 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 IKBKBO14920 756 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 CLIC2O15247 247 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 NOL4O94818 638 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 DLATP10515 647 aaKnown RBP23.24■■□□□ 1.31
CBWD1-223ENST00000613988 TNNI1P19237 187 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 CYP2J2P51589 502 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 SNRPFP62306 86 aaKnown RBP23.24■■□□□ 1.31
CBWD1-223ENST00000613988 CCDC142Q17RM4 750 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 ITPRIPL2Q3MIP1 535 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 CFAP221Q4G0U5 840 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 DGKKQ5KSL6 1271 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 HS2ST1Q7LGA3 356 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 TRAPPC11Q7Z392 1133 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 MON1AQ86VX9 555 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 SCN4BQ8IWT1 228 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 SPEM1Q8N4L4 309 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 USP13Q92995 863 aaPredicted RBP23.24■■□□□ 1.31
CBWD1-223ENST00000613988 FUBP3Q96I24 572 aaKnown RBP eCLIP23.24■■□□□ 1.31
CBWD1-223ENST00000613988 FNBP1Q96RU3 617 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 EPC1Q9H2F5 836 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 TDP1Q9NUW8 608 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 CCL26Q9Y258 94 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 GPR179Q6PRD1 2367 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 UBE4BO95155 1302 aa23.24■■□□□ 1.31
CBWD1-223ENST00000613988 GOLGA6L19H0YKK7 550 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 ATP2C2O75185 946 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 TDGF1P13385 188 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 LMO2P25791 158 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 ERCC5P28715 1186 aaPredicted RBP23.23■■□□□ 1.31
CBWD1-223ENST00000613988 EHHADHQ08426 723 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 GAS6Q14393 721 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 PON2Q15165 354 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 KMT5BQ4FZB7 885 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 FAM171BQ6P995 826 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 C4orf50Q6ZRC1 276 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 LIMS2Q7Z4I7 341 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 LUZP1Q86V48 1076 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 XXYLT1Q8NBI6 393 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 KBTBD7Q8WVZ9 684 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 CCDC127Q96BQ5 260 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 TRMT2BQ96GJ1 504 aaKnown RBP23.23■■□□□ 1.31
CBWD1-223ENST00000613988 MMS19Q96T76 1030 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 SLC39A2Q9NP94 309 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 EXOC1Q9NV70 894 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 MAGEC2Q9UBF1 373 aaPredicted RBP23.23■■□□□ 1.31
CBWD1-223ENST00000613988 CDH9Q9ULB4 789 aa23.23■■□□□ 1.31
CBWD1-223ENST00000613988 PPP1R2P41236 205 aa23.22■■□□□ 1.31
CBWD1-223ENST00000613988 FOXK2Q01167 660 aa23.22■■□□□ 1.31
CBWD1-223ENST00000613988 SATB1Q01826 763 aa23.22■■□□□ 1.31
CBWD1-223ENST00000613988 DHX40Q8IX18 779 aaKnown RBP23.22■■□□□ 1.31
CBWD1-223ENST00000613988 SECISBP2LQ93073 1101 aaKnown RBP23.22■■□□□ 1.31
CBWD1-223ENST00000613988 MYRFLQ96LU7 910 aa23.22■■□□□ 1.31
CBWD1-223ENST00000613988 FAM83CQ9BQN1 747 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms