RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 FAXDC2Q96IV6 333 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 SPATA17Q96L03 361 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 CEP295NLQ96MC4 621 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 MED15Q96RN5 788 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 TMEM30AQ9NV96 361 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 UXTQ9UBK9 157 aaPredicted RBP19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 PATJQ8NI35 1801 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 F8VP50 259 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 CILPO75339 1184 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 CFHP08603 1231 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 CCDC192P0DO97 292 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 CCDC130P13994 396 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 BMP8AQ7Z5Y6 402 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 TMEM150AQ86TG1 271 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 SMARCD1Q96GM5 515 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 C8orf48Q96LL4 319 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 MYRFLQ96LU7 910 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 ARID3AQ99856 593 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 MED10Q9BTT4 135 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 PLA2G2FQ9BZM2 168 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 TRPV4Q9HBA0 871 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 ZFP14Q9HCL3 533 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 SLC2A4RGQ9NR83 387 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 KRT82Q9NSB4 513 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 DACH1Q9UI36 760 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 FBXL21Q9UKT6 434 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 KMT2EQ8IZD2 1858 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 NCANO14594 1321 aa19.22■□□□□ 0.67
SEMA3B-211ENST00000612509 PMM2O15305 246 aa19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 TRIOO75962 3097 aa19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 MBD3O95983 291 aa19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 PDGFBP01127 241 aaPredicted RBP19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 F11P03951 625 aa19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 TRIM21P19474 475 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 RBM43Q6ZSC3 357 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 DENND5BQ6ZUT9 1274 aa19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 FUKQ8N0W3 1084 aa19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 CRYBG2Q8N1P7 616 aa19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 WHAMMQ8TF30 809 aa19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 TATDN2Q93075 761 aa19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 PBXIP1Q96AQ6 731 aa19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 CNOT6LQ96LI5 555 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 NT5C1AQ9BXI3 368 aa19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 TASP1Q9H6P5 420 aa19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 FAM49BQ9NUQ9 324 aa19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 ZNF638Q14966 1978 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-211ENST00000612509 COL4A2P08572 1712 aa19.2■□□□□ 0.66
SEMA3B-211ENST00000612509 ANAPC1Q9H1A4 1944 aa19.2■□□□□ 0.66
SEMA3B-211ENST00000612509 P4HA2O15460 535 aa19.2■□□□□ 0.66
SEMA3B-211ENST00000612509 DDX6P26196 483 aaKnown RBP eCLIP19.2■□□□□ 0.66
SEMA3B-211ENST00000612509 VITQ6UXI7 678 aa19.2■□□□□ 0.66
SEMA3B-211ENST00000612509 PAQR9Q6ZVX9 377 aa19.2■□□□□ 0.66
SEMA3B-211ENST00000612509 TTC39CQ8N584 583 aa19.2■□□□□ 0.66
SEMA3B-211ENST00000612509 SLC2A14Q8TDB8 520 aa19.2■□□□□ 0.66
SEMA3B-211ENST00000612509 FAM124BQ9H5Z6 455 aaPredicted RBP19.2■□□□□ 0.66
SEMA3B-211ENST00000612509 DMAP1Q9NPF5 467 aaPredicted RBP19.2■□□□□ 0.66
SEMA3B-211ENST00000612509 CISHQ9NSE2 258 aa19.2■□□□□ 0.66
SEMA3B-211ENST00000612509 WNT16Q9UBV4 365 aa19.2■□□□□ 0.66
SEMA3B-211ENST00000612509 ZMYM5Q9UJ78 669 aa19.2■□□□□ 0.66
SEMA3B-211ENST00000612509 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.2■□□□□ 0.66
SEMA3B-211ENST00000612509 KIF26AQ9ULI4 1882 aaPredicted RBP19.2■□□□□ 0.66
SEMA3B-211ENST00000612509 MYH10P35580 1976 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 PRAMEF12O95522 483 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 AFPP02771 609 aaKnown RBP19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 VIPR2P41587 438 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 USP46P62068 366 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 GPC5P78333 572 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 KCNH2Q12809 1159 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 CUL2Q13617 745 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 GRM2Q14416 872 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 ARID3BQ8IVW6 561 aaPredicted RBP19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 SUGP1Q8IWZ8 645 aaKnown RBP19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 SIX5Q8N196 739 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 FBXL6Q8N531 539 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 C12orf29Q8N999 325 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 DEPDC1BQ8WUY9 529 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 MRPS31Q92665 395 aaKnown RBP19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 RSPRY1Q96DX4 576 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 TTLL2Q9BWV7 592 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 ARHGEF3Q9NR81 526 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 CA14Q9ULX7 337 aa19.19■□□□□ 0.66
SEMA3B-211ENST00000612509 ZNF318Q5VUA4 2279 aa19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 MYO16Q9Y6X6 1858 aa19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 HEPACAM2A8MVW5 462 aa19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 AP1G2O75843 785 aa19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 ERCC5P28715 1186 aaPredicted RBP19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 ADORA2BP29275 332 aa19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 WEE1P30291 646 aa19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 CETN1Q12798 172 aa19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 LRMPQ12912 555 aa19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 TPD52L1Q16890 204 aaPredicted RBP19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 ZNF394Q53GI3 561 aa19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 E2F7Q96AV8 911 aa19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 NT5C1BQ96P26 610 aa19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 SLC46A2Q9BY10 475 aa19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 DNAI2Q9GZS0 605 aa19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 MFSD1Q9H3U5 465 aa19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 EHD2Q9NZN4 543 aa19.18■□□□□ 0.66
SEMA3B-211ENST00000612509 KRBA1A5PL33 1030 aa19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 PSMC3P17980 439 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms