RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 ZCWPW1Q9H0M4 648 aa18.54■□□□□ 0.56
SREK1-216ENST00000612404 OSGEPQ9NPF4 335 aa18.54■□□□□ 0.56
SREK1-216ENST00000612404 NCANO14594 1321 aa18.54■□□□□ 0.56
SREK1-216ENST00000612404 A0A0A6YYK5 440 aaPredicted RBP18.53■□□□□ 0.56
SREK1-216ENST00000612404 OR6C75A6NL08 312 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 PIK3R2O00459 728 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 AP1G2O75843 785 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 SOD2P04179 222 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 CYP1A2P05177 515 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 SETSIPP0DME0 302 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 TNNT1P13805 278 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 NPR3P17342 541 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 DNTTIP2Q5QJE6 756 aaKnown RBP18.53■□□□□ 0.56
SREK1-216ENST00000612404 PMF1Q6P1K2 205 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 SPATA2LQ8IUW3 424 aaPredicted RBP18.53■□□□□ 0.56
SREK1-216ENST00000612404 RNF10Q8N5U6 811 aaKnown RBP18.53■□□□□ 0.56
SREK1-216ENST00000612404 IPO4Q8TEX9 1081 aaKnown RBP18.53■□□□□ 0.56
SREK1-216ENST00000612404 SLC35F5Q8WV83 523 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 CLP1Q92989 425 aaKnown RBP18.53■□□□□ 0.56
SREK1-216ENST00000612404 TJP2Q9UDY2 1190 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 GRXCR1A8MXD5 290 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 FGF18O76093 207 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 BDNFP23560 247 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 MAP3K7CLP57077 242 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 KRT17Q04695 432 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 C4orf50Q6ZRC1 276 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 DDX53Q86TM3 631 aaKnown RBP18.53■□□□□ 0.56
SREK1-216ENST00000612404 RHOT2Q8IXI1 618 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 RNF168Q8IYW5 571 aaPredicted RBP18.53■□□□□ 0.56
SREK1-216ENST00000612404 C18orf8Q96DM3 657 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 SMARCD1Q96GM5 515 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 NUP85Q9BW27 656 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 UBE2OQ9C0C9 1292 aaKnown RBP18.53■□□□□ 0.56
SREK1-216ENST00000612404 CAPN6Q9Y6Q1 641 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 LAMA3Q16787 3333 aa18.53■□□□□ 0.56
SREK1-216ENST00000612404 TNRC18O15417 2968 aaPredicted RBP18.52■□□□□ 0.56
SREK1-216ENST00000612404 ERBB2P04626 1255 aa18.52■□□□□ 0.56
SREK1-216ENST00000612404 LINC00271P0C7V0 271 aa18.52■□□□□ 0.56
SREK1-216ENST00000612404 CPB1P15086 417 aa18.52■□□□□ 0.56
SREK1-216ENST00000612404 PSMD5Q16401 504 aa18.52■□□□□ 0.56
SREK1-216ENST00000612404 IFI16Q16666 785 aaKnown RBP18.52■□□□□ 0.56
SREK1-216ENST00000612404 FAM109BQ6ICB4 259 aaPredicted RBP18.52■□□□□ 0.56
SREK1-216ENST00000612404 SYT10Q6XYQ8 523 aa18.52■□□□□ 0.56
SREK1-216ENST00000612404 CLEC20AQ6ZU45 233 aa18.52■□□□□ 0.56
SREK1-216ENST00000612404 ZNF592Q92610 1267 aa18.52■□□□□ 0.56
SREK1-216ENST00000612404 CHST7Q9NS84 486 aa18.52■□□□□ 0.56
SREK1-216ENST00000612404 STRIP2Q9ULQ0 834 aa18.52■□□□□ 0.56
SREK1-216ENST00000612404 COG5Q9UP83 839 aa18.52■□□□□ 0.56
SREK1-216ENST00000612404 CHD9Q3L8U1 2897 aa18.52■□□□□ 0.56
SREK1-216ENST00000612404 CHD7Q9P2D1 2997 aa18.52■□□□□ 0.55
SREK1-216ENST00000612404 E5RJQ4 531 aa18.52■□□□□ 0.55
SREK1-216ENST00000612404 BEST1O76090 585 aa18.52■□□□□ 0.55
SREK1-216ENST00000612404 MYOGP15173 224 aa18.52■□□□□ 0.55
SREK1-216ENST00000612404 GLUD2P49448 558 aa18.52■□□□□ 0.55
SREK1-216ENST00000612404 ETF1P62495 437 aaKnown RBP18.52■□□□□ 0.55
SREK1-216ENST00000612404 RSPO2Q6UXX9 243 aaPredicted RBP18.52■□□□□ 0.55
SREK1-216ENST00000612404 VPS52Q8N1B4 723 aa18.52■□□□□ 0.55
SREK1-216ENST00000612404 SLC35F6Q8N357 371 aa18.52■□□□□ 0.55
SREK1-216ENST00000612404 KLHL23Q8NBE8 558 aa18.52■□□□□ 0.55
SREK1-216ENST00000612404 PGLYRP2Q96PD5 576 aa18.52■□□□□ 0.55
SREK1-216ENST00000612404 ALS2CR12Q96Q35 445 aa18.52■□□□□ 0.55
SREK1-216ENST00000612404 WDR24Q96S15 920 aa18.52■□□□□ 0.55
SREK1-216ENST00000612404 HERC2P3Q9BVR0 1158 aa18.52■□□□□ 0.55
SREK1-216ENST00000612404 RRAGDQ9NQL2 400 aaPredicted RBP18.52■□□□□ 0.55
SREK1-216ENST00000612404 AVENQ9NQS1 362 aaPredicted RBP18.52■□□□□ 0.55
SREK1-216ENST00000612404 ABI2Q9NYB9 513 aaPredicted RBP18.52■□□□□ 0.55
SREK1-216ENST00000612404 DNAI1Q9UI46 699 aa18.52■□□□□ 0.55
SREK1-216ENST00000612404 GOLGA8SH3BPF8 625 aa18.51■□□□□ 0.55
SREK1-216ENST00000612404 KIF2AO00139 706 aaPredicted RBP18.51■□□□□ 0.55
SREK1-216ENST00000612404 XPO1O14980 1071 aaKnown RBP18.51■□□□□ 0.55
SREK1-216ENST00000612404 RPL17P18621 184 aaKnown RBP18.51■□□□□ 0.55
SREK1-216ENST00000612404 CTNNB1P35222 781 aa18.51■□□□□ 0.55
SREK1-216ENST00000612404 NFE2Q16621 373 aaPredicted RBP18.51■□□□□ 0.55
SREK1-216ENST00000612404 ZNF564Q8TBZ8 553 aaPredicted RBP18.51■□□□□ 0.55
SREK1-216ENST00000612404 STK32AQ8WU08 396 aa18.51■□□□□ 0.55
SREK1-216ENST00000612404 PIK3R5Q8WYR1 880 aa18.51■□□□□ 0.55
SREK1-216ENST00000612404 KCNK16Q96T55 309 aa18.51■□□□□ 0.55
SREK1-216ENST00000612404 OXCT2Q9BYC2 517 aaPredicted RBP18.51■□□□□ 0.55
SREK1-216ENST00000612404 PARVAQ9NVD7 372 aa18.51■□□□□ 0.55
SREK1-216ENST00000612404 UVRAGQ9P2Y5 699 aa18.51■□□□□ 0.55
SREK1-216ENST00000612404 CDY1Q9Y6F8 540 aa18.51■□□□□ 0.55
SREK1-216ENST00000612404 URODP06132 367 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 DNAJB2P25686 324 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 PLA2G4AP47712 749 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 GABRB2P47870 512 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 CACNA2D1P54289 1103 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 SNX16P57768 344 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 DSG1Q02413 1049 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 DNAJC24Q6P3W2 148 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 PIGZQ86VD9 579 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 XYLT1Q86Y38 959 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 FBXO22Q8NEZ5 403 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 TRIM58Q8NG06 486 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 SMOQ99835 787 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 SLC4A5Q9BY07 1137 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 MIS12Q9H081 205 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 MRPL47Q9HD33 250 aaKnown RBP18.5■□□□□ 0.55
SREK1-216ENST00000612404 SCINQ9Y6U3 715 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 LINC01553A4QN01 128 aa18.5■□□□□ 0.55
SREK1-216ENST00000612404 H0YGN5 161 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms