RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 BNC1Q01954 994 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SSRP1Q08945 709 aaKnown RBP7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 BFSP1Q12934 665 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ZNF268Q14587 947 aaPredicted RBP7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 MTF1Q14872 753 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 RTP5Q14D33 572 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 EPHA7Q15375 998 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 HSF5Q4G112 596 aaPredicted RBP7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 EMC10Q5UCC4 262 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 CDCA2Q69YH5 1023 aaPredicted RBP7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 DHRS13Q6UX07 377 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ITIH5Q86UX2 942 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TMPRSS12Q86WS5 348 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SFTPA1Q8IWL2 248 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 APPL2Q8NEU8 664 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 CCDC148Q8NFR7 591 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TBCKQ8TEA7 893 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 FGF11Q92914 225 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 GTF3C6Q969F1 213 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 MED8Q96G25 268 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 HSPA12BQ96MM6 686 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 LPIN3Q9BQK8 851 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 LXNQ9BS40 222 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TRIM4Q9C037 500 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SH3GLB2Q9NR46 395 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TM7SF3Q9NS93 570 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 DUS2Q9NX74 493 aaKnown RBP7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 BCCIPQ9P287 314 aaKnown RBP eCLIP7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 NUB1Q9Y5A7 615 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 PCDHGB2Q9Y5G2 931 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 MYLKQ15746 1914 aa7.81□□□□□ -1.16
PTCHD3P1-201ENST00000612350 STK36Q9NRP7 1315 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 A0A0A0MRY4 1105 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TCRBV21S2A2A0A5A6 115 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ACKR2O00590 384 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TERTO14746 1132 aaKnown RBP7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 FLRT2O43155 660 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TNFSF14O43557 240 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 CILPO75339 1184 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 DGAT1O75907 488 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 GABRG2P18507 467 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ATF6P18850 670 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 MAOBP27338 520 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 KIR2DL1P43626 348 aaPredicted RBP7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 HMGN5P82970 282 aaKnown RBP7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 YWHAHQ04917 246 aaPredicted RBP7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 MESP2Q0VG99 397 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 KCNH2Q12809 1159 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 STK3Q13188 491 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 PRPF4BQ13523 1007 aaKnown RBP7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 CTTNQ14247 550 aaKnown RBP7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ZNF77Q15935 545 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 PREPLQ4J6C6 727 aaPredicted RBP7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 EOGTQ5NDL2 527 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TXNDC8Q6A555 127 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 GALNT17Q6IS24 598 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 Q6ZNB5 142 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 PGBD3Q8N328 593 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 BICD2Q8TD16 824 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SPIRE2Q8WWL2 714 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 DYDC2Q96IM9 177 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ADPGKQ9BRR6 497 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SLC26A6Q9BXS9 759 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 OXCT2Q9BYC2 517 aaPredicted RBP7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 NRSN2Q9GZP1 204 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 POLR3FQ9H1D9 316 aaPredicted RBP7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 LINC00597Q9H2U6 94 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 GAREM1Q9H706 876 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ZSWIM4Q9H7M6 989 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 NCOA5Q9HCD5 579 aaKnown RBP7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SLC38A7Q9NVC3 462 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 HSFX1Q9UBD0 423 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SUSD2Q9UGT4 822 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 FNDC3AQ9Y2H6 1198 aaKnown RBP7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TIMM13Q9Y5L4 95 aaPredicted RBP7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 WNT6Q9Y6F9 365 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 AK5Q9Y6K8 562 aa7.8□□□□□ -1.16
PTCHD3P1-201ENST00000612350 MYOFQ9NZM1 2061 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 LRRIQ4A6NIV6 560 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 OR6C75A6NL08 312 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ENO4A6NNW6 628 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 M0QZQ0 153 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SLC37A4O43826 429 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SLITRK3O94933 977 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 LARGE1O95461 756 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 KCNE1P15382 129 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 GNSP15586 552 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 HMGA1P17096 107 aaKnown RBP7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 DDX6P26196 483 aaKnown RBP eCLIP7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 MARCKSP29966 332 aaPredicted RBP7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 NMT1P30419 496 aaKnown RBP7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 MCM4P33991 863 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 NLRP12P59046 1061 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 CCDC173Q0VFZ6 552 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 NR1H3Q13133 447 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 HLA-BQ31612 363 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 DCAF4L1Q3SXM0 396 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SWT1Q5T5J6 900 aaKnown RBP7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 C6orf118Q5T5N4 469 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 MOXD1Q6UVY6 613 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms