RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 TAS1R2Q8TE23 839 aa9.25□□□□□ -0.93
SNCA-212ENST00000611107 SMARCD2Q92925 531 aa9.25□□□□□ -0.93
SNCA-212ENST00000611107 ELSPBP1Q96BH3 223 aa9.25□□□□□ -0.93
SNCA-212ENST00000611107 CHFRQ96EP1 664 aa9.25□□□□□ -0.93
SNCA-212ENST00000611107 PCED1BQ96HM7 432 aa9.25□□□□□ -0.93
SNCA-212ENST00000611107 CNOT6LQ96LI5 555 aaKnown RBP9.25□□□□□ -0.93
SNCA-212ENST00000611107 MMS19Q96T76 1030 aa9.25□□□□□ -0.93
SNCA-212ENST00000611107 DDX23Q9BUQ8 820 aaKnown RBP9.25□□□□□ -0.93
SNCA-212ENST00000611107 SRRTQ9BXP5 876 aaKnown RBP9.25□□□□□ -0.93
SNCA-212ENST00000611107 OXCT2Q9BYC2 517 aaPredicted RBP9.25□□□□□ -0.93
SNCA-212ENST00000611107 ZNF518BQ9C0D4 1074 aa9.25□□□□□ -0.93
SNCA-212ENST00000611107 ATXN3LQ9H3M9 355 aa9.25□□□□□ -0.93
SNCA-212ENST00000611107 MMRN2Q9H8L6 949 aa9.25□□□□□ -0.93
SNCA-212ENST00000611107 ARHGEF3Q9NR81 526 aa9.25□□□□□ -0.93
SNCA-212ENST00000611107 ANO10Q9NW15 660 aa9.25□□□□□ -0.93
SNCA-212ENST00000611107 GDE1Q9NZC3 331 aa9.25□□□□□ -0.93
SNCA-212ENST00000611107 ARMCX3Q9UH62 379 aaPredicted RBP9.25□□□□□ -0.93
SNCA-212ENST00000611107 MAFFQ9ULX9 164 aa9.25□□□□□ -0.93
SNCA-212ENST00000611107 ZFP37Q9Y6Q3 630 aaPredicted RBP9.25□□□□□ -0.93
SNCA-212ENST00000611107 GPR179Q6PRD1 2367 aa9.25□□□□□ -0.93
SNCA-212ENST00000611107 VPS13AQ96RL7 3174 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 OTOL1A6NHN0 477 aaPredicted RBP9.24□□□□□ -0.93
SNCA-212ENST00000611107 IKBKBO14920 756 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 TACC1O75410 805 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 BEST1O76090 585 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 MICAL2O94851 1124 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 STAU1O95793 577 aaKnown RBP9.24□□□□□ -0.93
SNCA-212ENST00000611107 PTPN1P18031 435 aaKnown RBP9.24□□□□□ -0.93
SNCA-212ENST00000611107 PAX3P23760 479 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 TARSP26639 723 aaKnown RBP9.24□□□□□ -0.93
SNCA-212ENST00000611107 PIK3CAP42336 1068 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 ASPAP45381 313 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 AP3M2P53677 418 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 STARD6P59095 220 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 TNK2Q07912 1038 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 BIRC3Q13489 604 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 NCOA4Q13772 614 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 SKOR2Q2VWA4 1001 aaPredicted RBP9.24□□□□□ -0.93
SNCA-212ENST00000611107 CT47A1Q5JQC4 288 aaPredicted RBP9.24□□□□□ -0.93
SNCA-212ENST00000611107 TCERG1LQ5VWI1 586 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 TXNDC8Q6A555 127 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 IQCEQ6IPM2 695 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 SCN4BQ8IWT1 228 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 CCDC105Q8IYK2 499 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 DCP1BQ8IZD4 617 aaKnown RBP9.24□□□□□ -0.93
SNCA-212ENST00000611107 ELMOD1Q8N336 334 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 ZMIZ2Q8NF64 920 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 OR6B3Q8NGW1 331 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 FAM200AQ8TCP9 573 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 WHAMMQ8TF30 809 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 NXPE3Q969Y0 559 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 CYP2S1Q96SQ9 504 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 HSD3B7Q9H2F3 369 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 TRPV4Q9HBA0 871 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 TMEM8AQ9HCN3 771 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 C2orf42Q9NWW7 574 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 HSFX1Q9UBD0 423 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 CDH9Q9ULB4 789 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 MAGED2Q9UNF1 606 aaPredicted RBP9.24□□□□□ -0.93
SNCA-212ENST00000611107 NFE2L3Q9Y4A8 694 aa9.24□□□□□ -0.93
SNCA-212ENST00000611107 RIF1Q5UIP0 2472 aaKnown RBP9.24□□□□□ -0.93
SNCA-212ENST00000611107 C2orf78A6NCI8 922 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 ZNF197O14709 1029 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 GALR2O43603 387 aaPredicted RBP9.23□□□□□ -0.93
SNCA-212ENST00000611107 NOL4O94818 638 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 ASS1P00966 412 aaKnown RBP9.23□□□□□ -0.93
SNCA-212ENST00000611107 CCDC192P0DO97 292 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 GDI1P31150 447 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 GNL1P36915 607 aaPredicted RBP9.23□□□□□ -0.93
SNCA-212ENST00000611107 LHX1P48742 406 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 FMO5P49326 533 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 TUFMP49411 452 aaKnown RBP9.23□□□□□ -0.93
SNCA-212ENST00000611107 CLCN5P51795 746 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 NOP14P78316 857 aaKnown RBP9.23□□□□□ -0.93
SNCA-212ENST00000611107 MYL7Q01449 175 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 TSPY1Q01534 308 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 MYL5Q02045 173 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 CYP27A1Q02318 531 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 MYO1EQ12965 1108 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 NCAPHQ15003 741 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 MLF2Q15773 248 aaPredicted RBP9.23□□□□□ -0.93
SNCA-212ENST00000611107 ZNF699Q32M78 642 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 CFAP221Q4G0U5 840 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 HSP90AA4PQ58FG1 418 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 CDKAL1Q5VV42 579 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 TRIM68Q6AZZ1 485 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 TXNDC11Q6PKC3 985 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 TPRG1Q6ZUI0 275 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 MTSS1LQ765P7 747 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 DPH6Q7L8W6 267 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 ALYREFQ86V81 257 aaKnown RBP9.23□□□□□ -0.93
SNCA-212ENST00000611107 SPATA2LQ8IUW3 424 aaPredicted RBP9.23□□□□□ -0.93
SNCA-212ENST00000611107 AOPEPQ8N6M6 819 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 MAB21L3Q8N8X9 362 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 C12orf29Q8N999 325 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 DTWD2Q8NBA8 298 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 MYCBPAPQ8TBZ2 947 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 ENOX1Q8TC92 643 aaKnown RBP9.23□□□□□ -0.93
SNCA-212ENST00000611107 USP13Q92995 863 aaPredicted RBP9.23□□□□□ -0.93
SNCA-212ENST00000611107 TATDN2Q93075 761 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms