RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 SLC17A7Q9P2U7 560 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 TMEM114B3SHH9 223 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 DENRO43583 198 aaKnown RBP13.13□□□□□ -0.31
CTCFL-218ENST00000608440 SPOPO43791 374 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 GUCY1B2O75343 617 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 PDE8BO95263 885 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 DLDP09622 509 aaKnown RBP13.13□□□□□ -0.31
CTCFL-218ENST00000608440 CHRNB1P11230 501 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 MXI1P50539 228 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 ALDH18A1P54886 795 aaKnown RBP13.13□□□□□ -0.31
CTCFL-218ENST00000608440 DNAL1Q4LDG9 190 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 DCAF17Q5H9S7 520 aaPredicted RBP13.13□□□□□ -0.31
CTCFL-218ENST00000608440 TCHHL1Q5QJ38 904 aaPredicted RBP13.13□□□□□ -0.31
CTCFL-218ENST00000608440 RFPL4BQ6ZWI9 263 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 AHI1Q8N157 1196 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 DNAJC18Q9H819 358 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 CYP4F11Q9HBI6 524 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 PALMDQ9NP74 551 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 KCNQ5Q9NR82 932 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 NCKIPSDQ9NZQ3 722 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 NENFQ9UMX5 172 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 CNTNAP5Q8WYK1 1306 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 SOBPA7XYQ1 873 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 TYROBPO43914 113 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 UGT1A9O60656 530 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 UGT1A6P19224 532 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 UGT1A1P22309 533 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 UGT1A4P22310 534 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 HMOX2P30519 316 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 UGT1A3P35503 534 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 UGT1A5P35504 534 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 FXNQ16595 210 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 COL24A1Q17RW2 1714 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 TIGD2Q4W5G0 525 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 ZNF804AQ7Z570 1209 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 SLC13A5Q86YT5 568 aaPredicted RBP13.12□□□□□ -0.31
CTCFL-218ENST00000608440 PSPC1Q8WXF1 523 aaKnown RBP13.12□□□□□ -0.31
CTCFL-218ENST00000608440 HSPH1Q92598 858 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 CALML4Q96GE6 196 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 RETREG1Q9H6L5 497 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 UGT1A7Q9HAW7 530 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 UGT1A10Q9HAW8 530 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 UGT1A8Q9HAW9 530 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 MKS1Q9NXB0 559 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 GOLGB1Q14789 3259 aaKnown RBP13.12□□□□□ -0.31
CTCFL-218ENST00000608440 UBR3Q6ZT12 1888 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 CLDN3O15551 220 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 KRT75O95678 551 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 TMEM253P0C7T8 217 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 ATF2P15336 505 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 ADAM17P78536 824 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 ALX1Q15699 326 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 CLUL1Q15846 466 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 LETM2Q2VYF4 491 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 ZNF829Q3KNS6 432 aaPredicted RBP13.12□□□□□ -0.31
CTCFL-218ENST00000608440 TPTE2Q6XPS3 522 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 CLVS1Q8IUQ0 354 aaPredicted RBP13.12□□□□□ -0.31
CTCFL-218ENST00000608440 ZFPM1Q8IX07 1006 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 MIGA1Q8NAN2 632 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 PDZD8Q8NEN9 1154 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 TSPAN14Q8NG11 270 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 CXorf38Q8TB03 319 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 TCP10LQ8TDR4 215 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 FAM118BQ9BPY3 351 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 ZSWIM1Q9BR11 485 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 DDX56Q9NY93 547 aaKnown RBP13.12□□□□□ -0.31
CTCFL-218ENST00000608440 TAGLN3Q9UI15 199 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 HDAC9Q9UKV0 1011 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 SCINQ9Y6U3 715 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 MROH5Q6ZUA9 1318 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 KRBA1A5PL33 1030 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 KITP10721 976 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 COMTP21964 271 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 BTDP43251 543 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 PEX3P56589 373 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 RAB15P59190 212 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 RPS3AP61247 264 aaKnown RBP13.12□□□□□ -0.31
CTCFL-218ENST00000608440 ITGADQ13349 1161 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 PUM3Q15397 648 aaKnown RBP13.12□□□□□ -0.31
CTCFL-218ENST00000608440 EDRF1Q3B7T1 1238 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 SGO2Q562F6 1265 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 DCLRE1AQ6PJP8 1040 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 USP43Q70EL4 1123 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
CTCFL-218ENST00000608440 TAMM41Q96BW9 452 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 RANBP9Q96S59 729 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 SHCBP1LQ9BZQ2 653 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 CHST7Q9NS84 486 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 TFCP2L1Q9NZI6 479 aa13.12□□□□□ -0.31
CTCFL-218ENST00000608440 SPEF2Q9C093 1822 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 TCRBV5S4A2TA0A5A2 114 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 PRR5-ARHGAP8B1AHC4 643 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 CCNT1O60563 726 aaKnown RBP13.11□□□□□ -0.31
CTCFL-218ENST00000608440 ZC3H11AO75152 810 aaKnown RBP eCLIP13.11□□□□□ -0.31
CTCFL-218ENST00000608440 RRM1P23921 792 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 ARHGAP8P85298 464 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 CACNB1Q02641 598 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-218ENST00000608440 TROAPQ12815 778 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 FAM20CQ8IXL6 584 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 LCORLQ8N3X6 602 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms