RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PORP16435 677 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 HSPA6P17066 643 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 XBP1P17861 261 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 MARK3P27448 753 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 CRABP2P29373 138 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 CDC25CP30307 473 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 CXCR5P32302 372 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 PMS2P54278 862 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 HPCAP84074 193 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 PDE1BQ01064 536 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 CREB5Q02930 508 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 KLRC3Q07444 240 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 TFCP2Q12800 502 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 AUHQ13825 339 aaKnown RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 CYLC2Q14093 348 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 DHX34Q14147 1143 aaKnown RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 MYBPC2Q14324 1141 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 GCKRQ14397 625 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 HLTFQ14527 1009 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 R3HDM1Q15032 1099 aaKnown RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 TRADDQ15628 312 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 SLC18A3Q16572 532 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZXDCQ2QGD7 858 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 MUM1Q2TAK8 710 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 SLC9C1Q4G0N8 1177 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 VWA3BQ502W6 1294 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 SLC45A4Q5BKX6 768 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 UBXN11Q5T124 520 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 SYCP2LQ5T4T6 812 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 NBPF12Q5TAG4 269 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 SNX30Q5VWJ9 437 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 TRIM68Q6AZZ1 485 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 CENPPQ6IPU0 288 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 CNNM4Q6P4Q7 775 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 PDXDC1Q6P996 788 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 CCDC174Q6PII3 467 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 Q6ZNX1 250 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 SEPT14Q6ZU15 432 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 MARK2Q7KZI7 788 aaKnown RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 TRMT10CQ7L0Y3 403 aaKnown RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 KRT26Q7Z3Y9 468 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 RALYLQ86SE5 291 aaKnown RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 RSPH3Q86UC2 560 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 TMEFF1Q8IYR6 380 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZBED8Q8IZ13 594 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 ALLCQ8N6M5 410 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 OR2W6PQ8NHA6 318 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 NEK9Q8TD19 979 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 TRPC4APQ8TEL6 797 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 NAT14Q8WUY8 206 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 UBLCP1Q8WVY7 318 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 APPBP2Q92624 585 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 P2RX5Q93086 422 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 OSBP2Q969R2 916 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 HAUS1Q96CS2 278 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 EPSTI1Q96J88 318 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 MS4A14Q96JA4 679 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZNF512BQ96KM6 892 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 RHOVQ96L33 236 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 SNX27Q96L92 541 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 FAM161BQ96MY7 647 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 AIFM3Q96NN9 605 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 PRMT1Q99873 361 aaKnown RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 ERP44Q9BS26 406 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 TBC1D10AQ9BXI6 508 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 EIF2AQ9BY44 585 aaKnown RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 RNF26Q9BY78 433 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZMYND12Q9H0C1 365 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZCWPW1Q9H0M4 648 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 NEUROG2Q9H2A3 272 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 TAOK3Q9H2K8 898 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 TMPRSS5Q9H3S3 457 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 DENND2DQ9H6A0 471 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 SYNCQ9H7C4 482 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 KBTBD4Q9NVX7 518 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 NMRK1Q9NWW6 199 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 PLK2Q9NYY3 685 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 TMOD4Q9NZQ9 345 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZNHIT2Q9UHR6 403 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 DBR1Q9UK59 544 aaKnown RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZMYND8Q9ULU4 1186 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 G3BP2Q9UN86 482 aaKnown RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 TFR2Q9UP52 801 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZNF281Q9Y2X9 895 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 UTP11Q9Y3A2 253 aaKnown RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 TOPAZ1Q8N9V7 1692 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 LMO7Q8WWI1 1683 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 LRP6O75581 1613 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 USP6P35125 1406 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 MYH11P35749 1972 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 METP08581 1390 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 CHD4Q14839 1912 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 UMODL1Q5DID0 1318 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 A0A1W2PQ45 241 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 A0A1W2PQY0 241 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 ESYT3A0FGR9 886 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZSCAN5CA6NGD5 496 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 A8MUI8 341 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 FADS2P1A8MWK0 482 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 TCP11X1B4DZS4 312 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms