RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 RHOBTB2Q9BYZ6 727 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 LHX5Q9H2C1 402 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 MED4Q9NPJ6 270 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 ADAM22Q9P0K1 906 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 CTTNBP2NLQ9P2B4 639 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 HYOU1Q9Y4L1 999 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 PCDHGC5Q9Y5F6 944 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 AMHP03971 560 aa18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 ERBB2P04626 1255 aa18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 PTPN1P18031 435 aaKnown RBP18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 RABGGTBP53611 331 aa18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 FPGSQ05932 587 aa18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 PDCLQ13371 301 aa18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 ARHGAP17Q68EM7 881 aa18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 PAQR9Q6ZVX9 377 aa18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 ZNF572Q7Z3I7 529 aaPredicted RBP18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 FUKQ8N0W3 1084 aa18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 ZNF689Q96CS4 500 aaPredicted RBP18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 NUP85Q9BW27 656 aa18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 TMEM30AQ9NV96 361 aa18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 PRKAG2Q9UGJ0 569 aa18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 ADAM28Q9UKQ2 775 aa18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 PCDHB8Q9UN66 801 aa18.33■□□□□ 0.52
PPFIA3-207ENST00000602716 ZBBXA8MT70 800 aa18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 BUB1BO60566 1050 aaPredicted RBP18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 GABBR2O75899 941 aa18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 RGS7P49802 495 aa18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 HSP90B2PQ58FF3 399 aa18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 COL13A1Q5TAT6 717 aaPredicted RBP18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 OVOS1Q6IE37 1185 aa18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 FAM43BQ6ZT52 329 aaPredicted RBP18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 CREG2Q8IUH2 290 aa18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.32■□□□□ 0.529e-6■■■■■ 27.7
PPFIA3-207ENST00000602716 TMLHEQ9NVH6 421 aa18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 PACSIN2Q9UNF0 486 aaPredicted RBP18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 OR4Q2P0C623 313 aa18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 PRLRP16471 622 aa18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 CACNA2D1P54289 1103 aa18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 C1QBPQ07021 282 aaKnown RBP18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 PDE4CQ08493 712 aa18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 RNF10Q8N5U6 811 aaKnown RBP18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 PIWIL1Q96J94 861 aaKnown RBP18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 TNIP3Q96KP6 325 aa18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 PKMYT1Q99640 499 aa18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 KIAA1257Q9ULG3 409 aa18.32■□□□□ 0.52
PPFIA3-207ENST00000602716 TCRBV5S1A1TA0A578 114 aa18.31■□□□□ 0.52
PPFIA3-207ENST00000602716 TADA2AO75478 443 aa18.31■□□□□ 0.52
PPFIA3-207ENST00000602716 BEST1O76090 585 aa18.31■□□□□ 0.52
PPFIA3-207ENST00000602716 LHX1P48742 406 aa18.31■□□□□ 0.52
PPFIA3-207ENST00000602716 PPIGQ13427 754 aaKnown RBP eCLIP18.31■□□□□ 0.527e-7■■■□□ 17.9
PPFIA3-207ENST00000602716 TMEM240Q5SV17 173 aa18.31■□□□□ 0.52
PPFIA3-207ENST00000602716 LRRTM3Q86VH5 581 aa18.31■□□□□ 0.52
PPFIA3-207ENST00000602716 ZNF564Q8TBZ8 553 aaPredicted RBP18.31■□□□□ 0.52
PPFIA3-207ENST00000602716 VN1R3Q9BXE9 311 aa18.31■□□□□ 0.52
PPFIA3-207ENST00000602716 B3GNT5Q9BYG0 378 aa18.31■□□□□ 0.52
PPFIA3-207ENST00000602716 ZNF518BQ9C0D4 1074 aa18.31■□□□□ 0.52
PPFIA3-207ENST00000602716 HPCAL4Q9UM19 191 aa18.31■□□□□ 0.52
PPFIA3-207ENST00000602716 CEP83Q9Y592 693 aa18.31■□□□□ 0.52
PPFIA3-207ENST00000602716 MRPL42Q9Y6G3 142 aaKnown RBP18.31■□□□□ 0.52
PPFIA3-207ENST00000602716 BAIAP3O94812 1187 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 TYMPP19971 482 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 LAMA2P24043 3122 aaKnown RBP18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 ITIH3Q06033 890 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 C2orf54Q08AI8 447 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 ZSCAN26Q16670 478 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 PMF1Q6P1K2 205 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 FUT10Q6P4F1 479 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 TAS1R1Q7RTX1 841 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 MMGT1Q8N4V1 131 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 ZBTB9Q96C00 473 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 PCED1BQ96HM7 432 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 TMEM110-MUSTN1A8MSY1 372 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 E5RJQ4 531 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 FAM163BP0C2L3 166 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 DNA2P51530 1060 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 INTS6LQ5JSJ4 861 aaKnown RBP18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 FAM171A1Q5VUB5 890 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 CCNI2Q6ZMN8 369 aaPredicted RBP18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 ERICH1Q86X53 443 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 METTL23Q86XA0 190 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 COG1Q8WTW3 980 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 MYLPFQ96A32 169 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 ALS2CR12Q96Q35 445 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 TMEM175Q9BSA9 504 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 AVENQ9NQS1 362 aaPredicted RBP18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 CDH9Q9ULB4 789 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 VWA8A3KMH1 1905 aa18.3■□□□□ 0.52
PPFIA3-207ENST00000602716 ALDH2P05091 517 aa18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 TNNT3P45378 269 aaPredicted RBP18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 YWHAHQ04917 246 aaPredicted RBP18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 MAMLD1Q13495 774 aa18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 STILQ15468 1287 aa18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 RTP2Q5QGT7 225 aa18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 PLEKHA7Q6IQ23 1121 aa18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 FAM35AQ86V20 835 aa18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 CEP57Q86XR8 500 aa18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 XYLT1Q86Y38 959 aa18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 RHOT2Q8IXI1 618 aa18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 ABHD8Q96I13 439 aa18.29■□□□□ 0.52
PPFIA3-207ENST00000602716 PSMB7Q99436 277 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms