RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 ZNF518BQ9C0D4 1074 aa17.8■□□□□ 0.44
SSBP4-213ENST00000602088 ZFP14Q9HCL3 533 aa17.8■□□□□ 0.44
SSBP4-213ENST00000602088 SLC2A4RGQ9NR83 387 aa17.8■□□□□ 0.44
SSBP4-213ENST00000602088 TMEM30AQ9NV96 361 aa17.8■□□□□ 0.44
SSBP4-213ENST00000602088 UXTQ9UBK9 157 aaPredicted RBP17.8■□□□□ 0.44
SSBP4-213ENST00000602088 WNT16Q9UBV4 365 aa17.8■□□□□ 0.44
SSBP4-213ENST00000602088 F8VP50 259 aa17.79■□□□□ 0.44
SSBP4-213ENST00000602088 TRIM66O15016 1216 aa17.79■□□□□ 0.44
SSBP4-213ENST00000602088 CILPO75339 1184 aa17.79■□□□□ 0.44
SSBP4-213ENST00000602088 CFHP08603 1231 aa17.79■□□□□ 0.44
SSBP4-213ENST00000602088 CD58P19256 250 aa17.79■□□□□ 0.44
SSBP4-213ENST00000602088 GPC5P78333 572 aa17.79■□□□□ 0.44
SSBP4-213ENST00000602088 CYP4F8P98187 520 aa17.79■□□□□ 0.44
SSBP4-213ENST00000602088 ORC1Q13415 861 aa17.79■□□□□ 0.44
SSBP4-213ENST00000602088 GPR158Q5T848 1215 aa17.79■□□□□ 0.44
SSBP4-213ENST00000602088 FUKQ8N0W3 1084 aa17.79■□□□□ 0.44
SSBP4-213ENST00000602088 WHAMMQ8TF30 809 aa17.79■□□□□ 0.44
SSBP4-213ENST00000602088 GCNAQ96QF7 691 aa17.79■□□□□ 0.44
SSBP4-213ENST00000602088 TWNKQ96RR1 684 aa17.79■□□□□ 0.44
SSBP4-213ENST00000602088 NT5C1AQ9BXI3 368 aa17.79■□□□□ 0.44
SSBP4-213ENST00000602088 TASP1Q9H6P5 420 aa17.79■□□□□ 0.44
SSBP4-213ENST00000602088 GREB1Q4ZG55 1949 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 DENND4CQ5VZ89 1909 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 ZDBF2Q9HCK1 2354 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 PDGFBP01127 241 aaPredicted RBP17.78■□□□□ 0.44
SSBP4-213ENST00000602088 CCDC192P0DO97 292 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 ANXA13P27216 316 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 WEE1P30291 646 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 VIPR2P41587 438 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 DPCR1Q3MIW9 517 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 DENND5BQ6ZUT9 1274 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 FAM35AQ86V20 835 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 ARID3BQ8IVW6 561 aaPredicted RBP17.78■□□□□ 0.44
SSBP4-213ENST00000602088 FBXL6Q8N531 539 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 TTC39CQ8N584 583 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 C12orf29Q8N999 325 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 SLC46A2Q9BY10 475 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 FAM124BQ9H5Z6 455 aaPredicted RBP17.78■□□□□ 0.44
SSBP4-213ENST00000602088 ZMYM5Q9UJ78 669 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 FBXL21Q9UKT6 434 aa17.78■□□□□ 0.44
SSBP4-213ENST00000602088 ATP8B3O60423 1300 aa17.77■□□□□ 0.44
SSBP4-213ENST00000602088 SOBPA7XYQ1 873 aa17.77■□□□□ 0.44
SSBP4-213ENST00000602088 P4HA2O15460 535 aa17.77■□□□□ 0.44
SSBP4-213ENST00000602088 TADA3O75528 432 aa17.77■□□□□ 0.44
SSBP4-213ENST00000602088 CCDC130P13994 396 aa17.77■□□□□ 0.44
SSBP4-213ENST00000602088 TRIM21P19474 475 aaKnown RBP17.77■□□□□ 0.44
SSBP4-213ENST00000602088 USP46P62068 366 aa17.77■□□□□ 0.44
SSBP4-213ENST00000602088 KCNH2Q12809 1159 aa17.77■□□□□ 0.44
SSBP4-213ENST00000602088 VITQ6UXI7 678 aa17.77■□□□□ 0.44
SSBP4-213ENST00000602088 RBM43Q6ZSC3 357 aaKnown RBP17.77■□□□□ 0.44
SSBP4-213ENST00000602088 IRF2BP1Q8IU81 584 aa17.77■□□□□ 0.44
SSBP4-213ENST00000602088 MFSD6LQ8IWD5 586 aa17.77■□□□□ 0.44
SSBP4-213ENST00000602088 MRPS31Q92665 395 aaKnown RBP17.77■□□□□ 0.44
SSBP4-213ENST00000602088 E2F7Q96AV8 911 aa17.77■□□□□ 0.44
SSBP4-213ENST00000602088 ARID3AQ99856 593 aa17.77■□□□□ 0.44
SSBP4-213ENST00000602088 MED10Q9BTT4 135 aa17.77■□□□□ 0.44
SSBP4-213ENST00000602088 TTLL2Q9BWV7 592 aa17.77■□□□□ 0.44
SSBP4-213ENST00000602088 CISHQ9NSE2 258 aa17.77■□□□□ 0.44
SSBP4-213ENST00000602088 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.77■□□□□ 0.44
SSBP4-213ENST00000602088 OBSL1O75147 1896 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 KRBA1A5PL33 1030 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 PSMC3P17980 439 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 DDX6P26196 483 aaKnown RBP eCLIP17.76■□□□□ 0.431e-6■■■■□ 24.4
SSBP4-213ENST00000602088 ERCC5P28715 1186 aaPredicted RBP17.76■□□□□ 0.43
SSBP4-213ENST00000602088 CETN1Q12798 172 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 CUL2Q13617 745 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 GPIHBP1Q8IV16 184 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 CMTM8Q8IZV2 173 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 SIX5Q8N196 739 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 LMO3Q8TAP4 145 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 SLC2A14Q8TDB8 520 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 RSPRY1Q96DX4 576 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 SMARCD1Q96GM5 515 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 CNOT6LQ96LI5 555 aaKnown RBP17.76■□□□□ 0.43
SSBP4-213ENST00000602088 KCNK16Q96T55 309 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 HNRNPABQ99729 332 aaKnown RBP17.76■□□□□ 0.43
SSBP4-213ENST00000602088 TRMT61BQ9BVS5 477 aaKnown RBP17.76■□□□□ 0.43
SSBP4-213ENST00000602088 DMAP1Q9NPF5 467 aaPredicted RBP17.76■□□□□ 0.43
SSBP4-213ENST00000602088 FAM49BQ9NUQ9 324 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 EHD2Q9NZN4 543 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 DACH1Q9UI36 760 aa17.76■□□□□ 0.43
SSBP4-213ENST00000602088 NCANO14594 1321 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 WDFY4Q6ZS81 3184 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 HEPACAM2A8MVW5 462 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 AP1G2O75843 785 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 MBD3O95983 291 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 AFPP02771 609 aaKnown RBP17.75■□□□□ 0.43
SSBP4-213ENST00000602088 COL9A1P20849 921 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 LRMPQ12912 555 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 GRM2Q14416 872 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 ZNF394Q53GI3 561 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 CT47A1Q5JQC4 288 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-213ENST00000602088 TXNDC8Q6A555 127 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 MON1AQ86VX9 555 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 SUGP1Q8IWZ8 645 aaKnown RBP17.75■□□□□ 0.43
SSBP4-213ENST00000602088 MAB21L3Q8N8X9 362 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 EHBP1Q8NDI1 1231 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 DEPDC1BQ8WUY9 529 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 CYFIP2Q96F07 1278 aa17.75■□□□□ 0.43
SSBP4-213ENST00000602088 DNAI2Q9GZS0 605 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms