RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 VIPR2P41587 438 aa29.97■■■□□ 2.39
SSBP4-206ENST00000599699 GPC5P78333 572 aa29.97■■■□□ 2.39
SSBP4-206ENST00000599699 INCA1Q0VD86 236 aa29.97■■■□□ 2.39
SSBP4-206ENST00000599699 CETN1Q12798 172 aa29.97■■■□□ 2.39
SSBP4-206ENST00000599699 TPD52L1Q16890 204 aaPredicted RBP29.97■■■□□ 2.39
SSBP4-206ENST00000599699 BMP8AQ7Z5Y6 402 aa29.97■■■□□ 2.39
SSBP4-206ENST00000599699 SUGP1Q8IWZ8 645 aaKnown RBP29.97■■■□□ 2.39
SSBP4-206ENST00000599699 CRYBG2Q8N1P7 616 aa29.97■■■□□ 2.39
SSBP4-206ENST00000599699 TATDN2Q93075 761 aa29.97■■■□□ 2.39
SSBP4-206ENST00000599699 NT5C1AQ9BXI3 368 aa29.97■■■□□ 2.39
SSBP4-206ENST00000599699 PLA2G2FQ9BZM2 168 aa29.97■■■□□ 2.39
SSBP4-206ENST00000599699 TASP1Q9H6P5 420 aa29.97■■■□□ 2.39
SSBP4-206ENST00000599699 DACH1Q9UI36 760 aa29.97■■■□□ 2.39
SSBP4-206ENST00000599699 PDGFBP01127 241 aaPredicted RBP29.96■■■□□ 2.39
SSBP4-206ENST00000599699 DPCR1Q3MIW9 517 aa29.96■■■□□ 2.39
SSBP4-206ENST00000599699 FAM35AQ86V20 835 aa29.96■■■□□ 2.39
SSBP4-206ENST00000599699 GPIHBP1Q8IV16 184 aa29.96■■■□□ 2.39
SSBP4-206ENST00000599699 MRPS31Q92665 395 aaKnown RBP29.96■■■□□ 2.39
SSBP4-206ENST00000599699 TRMT2BQ96GJ1 504 aaKnown RBP29.96■■■□□ 2.39
SSBP4-206ENST00000599699 FAXDC2Q96IV6 333 aa29.96■■■□□ 2.39
SSBP4-206ENST00000599699 C8orf48Q96LL4 319 aa29.96■■■□□ 2.39
SSBP4-206ENST00000599699 CEP295NLQ96MC4 621 aa29.96■■■□□ 2.39
SSBP4-206ENST00000599699 FAM49BQ9NUQ9 324 aa29.96■■■□□ 2.39
SSBP4-206ENST00000599699 CA14Q9ULX7 337 aa29.96■■■□□ 2.39
SSBP4-206ENST00000599699 UTP18Q9Y5J1 556 aaKnown RBP eCLIP29.96■■■□□ 2.39
SSBP4-206ENST00000599699 F11P03951 625 aa29.95■■■□□ 2.39
SSBP4-206ENST00000599699 CCDC130P13994 396 aa29.95■■■□□ 2.39
SSBP4-206ENST00000599699 CACNA2D1P54289 1103 aa29.95■■■□□ 2.39
SSBP4-206ENST00000599699 LRMPQ12912 555 aa29.95■■■□□ 2.39
SSBP4-206ENST00000599699 GRM2Q14416 872 aa29.95■■■□□ 2.39
SSBP4-206ENST00000599699 DENND5BQ6ZUT9 1274 aa29.95■■■□□ 2.39
SSBP4-206ENST00000599699 TRIM59Q8IWR1 403 aa29.95■■■□□ 2.39
SSBP4-206ENST00000599699 SIX5Q8N196 739 aa29.95■■■□□ 2.39
SSBP4-206ENST00000599699 C12orf29Q8N999 325 aa29.95■■■□□ 2.39
SSBP4-206ENST00000599699 MYRFLQ96LU7 910 aa29.95■■■□□ 2.39
SSBP4-206ENST00000599699 TWNKQ96RR1 684 aa29.95■■■□□ 2.39
SSBP4-206ENST00000599699 TRPV4Q9HBA0 871 aa29.95■■■□□ 2.39
SSBP4-206ENST00000599699 SLC2A4RGQ9NR83 387 aa29.95■■■□□ 2.39
SSBP4-206ENST00000599699 EHD2Q9NZN4 543 aa29.95■■■□□ 2.39
SSBP4-206ENST00000599699 WNT16Q9UBV4 365 aa29.95■■■□□ 2.39
SSBP4-206ENST00000599699 DPYSL4O14531 572 aa29.94■■■□□ 2.38
SSBP4-206ENST00000599699 CILPO75339 1184 aa29.94■■■□□ 2.38
SSBP4-206ENST00000599699 TMEM150AQ86TG1 271 aa29.94■■■□□ 2.38
SSBP4-206ENST00000599699 ARID3BQ8IVW6 561 aaPredicted RBP29.94■■■□□ 2.38
SSBP4-206ENST00000599699 FBXL6Q8N531 539 aa29.94■■■□□ 2.38
SSBP4-206ENST00000599699 TTC39CQ8N584 583 aa29.94■■■□□ 2.38
SSBP4-206ENST00000599699 SLC2A14Q8TDB8 520 aa29.94■■■□□ 2.38
SSBP4-206ENST00000599699 SMARCD1Q96GM5 515 aa29.94■■■□□ 2.38
SSBP4-206ENST00000599699 ARID3AQ99856 593 aa29.94■■■□□ 2.38
SSBP4-206ENST00000599699 KRT82Q9NSB4 513 aa29.94■■■□□ 2.38
SSBP4-206ENST00000599699 CISHQ9NSE2 258 aa29.94■■■□□ 2.38
SSBP4-206ENST00000599699 AP1G2O75843 785 aa29.93■■■□□ 2.38
SSBP4-206ENST00000599699 MBD3O95983 291 aa29.93■■■□□ 2.38
SSBP4-206ENST00000599699 RFX1P22670 979 aa29.93■■■□□ 2.38
SSBP4-206ENST00000599699 MARSP56192 900 aaKnown RBP29.93■■■□□ 2.38
SSBP4-206ENST00000599699 KCNH2Q12809 1159 aa29.93■■■□□ 2.38
SSBP4-206ENST00000599699 ZNF394Q53GI3 561 aa29.93■■■□□ 2.38
SSBP4-206ENST00000599699 FUKQ8N0W3 1084 aa29.93■■■□□ 2.38
SSBP4-206ENST00000599699 MAB21L3Q8N8X9 362 aa29.93■■■□□ 2.38
SSBP4-206ENST00000599699 E2F7Q96AV8 911 aa29.93■■■□□ 2.38
SSBP4-206ENST00000599699 CNOT6LQ96LI5 555 aaKnown RBP29.93■■■□□ 2.38
SSBP4-206ENST00000599699 MED15Q96RN5 788 aa29.93■■■□□ 2.38
SSBP4-206ENST00000599699 TRMT61BQ9BVS5 477 aaKnown RBP29.93■■■□□ 2.38
SSBP4-206ENST00000599699 SLC46A2Q9BY10 475 aa29.93■■■□□ 2.38
SSBP4-206ENST00000599699 TMEM30AQ9NV96 361 aa29.93■■■□□ 2.38
SSBP4-206ENST00000599699 HEPACAM2A8MVW5 462 aa29.92■■■□□ 2.38
SSBP4-206ENST00000599699 STK25O00506 426 aa29.92■■■□□ 2.38
SSBP4-206ENST00000599699 AFPP02771 609 aaKnown RBP29.92■■■□□ 2.38
SSBP4-206ENST00000599699 COL9A1P20849 921 aa29.92■■■□□ 2.38
SSBP4-206ENST00000599699 DDX6P26196 483 aaKnown RBP eCLIP29.92■■■□□ 2.382e-8■□□□□ 8.2
SSBP4-206ENST00000599699 ADORA2BP29275 332 aa29.92■■■□□ 2.38
SSBP4-206ENST00000599699 PFKPQ01813 784 aa29.92■■■□□ 2.38
SSBP4-206ENST00000599699 IFRD2Q12894 506 aaPredicted RBP29.92■■■□□ 2.38
SSBP4-206ENST00000599699 TXNDC8Q6A555 127 aa29.92■■■□□ 2.38
SSBP4-206ENST00000599699 VITQ6UXI7 678 aa29.92■■■□□ 2.38
SSBP4-206ENST00000599699 PAQR9Q6ZVX9 377 aa29.92■■■□□ 2.38
SSBP4-206ENST00000599699 WHAMMQ8TF30 809 aa29.92■■■□□ 2.38
SSBP4-206ENST00000599699 KCNK16Q96T55 309 aa29.92■■■□□ 2.38
SSBP4-206ENST00000599699 TRPC7Q9HCX4 862 aa29.92■■■□□ 2.38
SSBP4-206ENST00000599699 DMAP1Q9NPF5 467 aaPredicted RBP29.92■■■□□ 2.38
SSBP4-206ENST00000599699 ZMYM5Q9UJ78 669 aa29.92■■■□□ 2.38
SSBP4-206ENST00000599699 PMM2O15305 246 aa29.91■■■□□ 2.38
SSBP4-206ENST00000599699 P4HA2O15460 535 aa29.91■■■□□ 2.38
SSBP4-206ENST00000599699 PSMC3P17980 439 aa29.91■■■□□ 2.38
SSBP4-206ENST00000599699 AVPR1AP37288 418 aa29.91■■■□□ 2.38
SSBP4-206ENST00000599699 USP46P62068 366 aa29.91■■■□□ 2.38
SSBP4-206ENST00000599699 CUL2Q13617 745 aa29.91■■■□□ 2.38
SSBP4-206ENST00000599699 YAF2Q8IY57 180 aa29.91■■■□□ 2.38
SSBP4-206ENST00000599699 FLCNQ8NFG4 579 aa29.91■■■□□ 2.38
SSBP4-206ENST00000599699 DEPDC1BQ8WUY9 529 aa29.91■■■□□ 2.38
SSBP4-206ENST00000599699 HEXIM2Q96MH2 286 aaKnown RBP29.91■■■□□ 2.38
SSBP4-206ENST00000599699 BRD9Q9H8M2 597 aa29.91■■■□□ 2.38
SSBP4-206ENST00000599699 ERCC5P28715 1186 aaPredicted RBP29.9■■■□□ 2.38
SSBP4-206ENST00000599699 YWHAEP62258 255 aaKnown RBP29.9■■■□□ 2.38
SSBP4-206ENST00000599699 MFSD6LQ8IWD5 586 aa29.9■■■□□ 2.38
SSBP4-206ENST00000599699 CMTM8Q8IZV2 173 aa29.9■■■□□ 2.38
SSBP4-206ENST00000599699 CYFIP2Q96F07 1278 aa29.9■■■□□ 2.38
SSBP4-206ENST00000599699 NT5C1BQ96P26 610 aa29.9■■■□□ 2.38
SSBP4-206ENST00000599699 SMG9Q9H0W8 520 aaKnown RBP29.9■■■□□ 2.38
SSBP4-206ENST00000599699 ARHGEF3Q9NR81 526 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms