RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 CCDC65Q8IXS2 484 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 MDGA1Q8NFP4 955 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 BSNDQ8WZ55 320 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 SLC39A7Q92504 469 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 KIFAP3Q92845 792 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 C18orf25Q96B23 403 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 SUSD3Q96L08 255 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 GCNAQ96QF7 691 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 UBL7Q96S82 380 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 FAM83CQ9BQN1 747 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 KIFC3Q9BVG8 833 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 TASP1Q9H6P5 420 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 PANK4Q9NVE7 773 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 MAFFQ9ULX9 164 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 CCL26Q9Y258 94 aa14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 TIMM13Q9Y5L4 95 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-218ENST00000598907 UPK3BL1B0FP48 263 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 UPK3BL2E5RIL1 263 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 OPHN1O60890 802 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 KRT18P05783 430 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 FTH1P19P0C7X4 201 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 GAP43P17677 238 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 YARSP54577 528 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 AMPD2Q01433 879 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 MORC3Q14149 939 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 ZSCAN23Q3MJ62 389 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 MINDY1Q8N5J2 469 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 FRMD1Q8N878 549 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 APPL2Q8NEU8 664 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 ADAMTS14Q8WXS8 1223 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 CNOT6LQ96LI5 555 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 DRC1Q96MC2 740 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 ZMAT2Q96NC0 199 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 FIZ1Q96SL8 496 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 LPIN3Q9BQK8 851 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 NTPCRQ9BSD7 190 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 CCDC113Q9H0I3 377 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 C2orf40Q9H1Z8 148 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 C17orf75Q9HAS0 396 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 POLD4Q9HCU8 107 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 SLC38A7Q9NVC3 462 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 MAN1B1Q9UKM7 699 aa14.97□□□□□ -0.01
SHKBP1-218ENST00000598907 PLXNB3Q9ULL4 1909 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 KALRNO60229 2985 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 SFI1A8K8P3 1242 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 ACKR2O00590 384 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 FGF19O95750 216 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 PLS3P13797 630 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 IDEP14735 1019 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 BMP6P22004 513 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 ITPKAP23677 461 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 GJA4P35212 333 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 YWHAHQ04917 246 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 BFSP1Q12934 665 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 TRIP6Q15654 476 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 C2orf27AQ580R0 203 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 ATF7IP2Q5U623 682 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 LYSMD4Q5XG99 296 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 SLC23A3Q6PIS1 610 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 ZNF605Q86T29 641 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 TMEM130Q8N3G9 435 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 CCDC33Q8N5R6 958 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 TRIML1Q8N9V2 468 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 RIN3Q8TB24 985 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 DEPTORQ8TB45 409 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 KCNN1Q92952 543 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 CD101Q93033 1021 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 PSMG2Q969U7 264 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 SPACA7Q96KW9 195 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 FUCA2Q9BTY2 467 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 PARVGQ9HBI0 331 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 OLFML3Q9NRN5 406 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 TOPORSQ9NS56 1045 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 RMND1Q9NWS8 449 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 SEL1LQ9UBV2 794 aa14.96□□□□□ -0.01
SHKBP1-218ENST00000598907 ZNF462Q96JM2 2506 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 ANTXRLA6NF34 631 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 TNFRSF10BO14763 440 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 SH3BP5O60239 455 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 TBCAO75347 108 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 FAM13AO94988 1023 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 MAPTP10636 758 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 GFPT1Q06210 699 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 CC2D1AQ6P1N0 951 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 RASSF3Q86WH2 238 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 SFR1Q86XK3 245 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 ATAD1Q8NBU5 361 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 BEST2Q8NFU1 509 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 SPIRE2Q8WWL2 714 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 DCBLD2Q96PD2 775 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 FNBP1Q96RU3 617 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 CCDC94Q9BW85 323 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 STRA6Q9BX79 667 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 SLC46A2Q9BY10 475 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 LARSQ9P2J5 1176 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 PCDHB8Q9UN66 801 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 PCDHB9Q9Y5E1 797 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 RAI2Q9Y5P3 530 aa14.95□□□□□ -0.02
SHKBP1-218ENST00000598907 SYCE3A1L190 88 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 MTMR11A4FU01 709 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms