RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 MSANTD4Q8NCY6 345 aa24.64■■□□□ 1.53
SYMPK-212ENST00000598896 B3GALT6Q96L58 329 aa24.64■■□□□ 1.53
SYMPK-212ENST00000598896 TMLHEQ9NVH6 421 aa24.64■■□□□ 1.53
SYMPK-212ENST00000598896 GOLGA8SH3BPF8 625 aa24.63■■□□□ 1.53
SYMPK-212ENST00000598896 ZNF185O15231 689 aa24.63■■□□□ 1.53
SYMPK-212ENST00000598896 FAM171A1Q5VUB5 890 aa24.63■■□□□ 1.53
SYMPK-212ENST00000598896 LRRTM3Q86VH5 581 aa24.63■■□□□ 1.53
SYMPK-212ENST00000598896 FEZF2Q8TBJ5 459 aa24.63■■□□□ 1.53
SYMPK-212ENST00000598896 IPO4Q8TEX9 1081 aaKnown RBP24.63■■□□□ 1.53
SYMPK-212ENST00000598896 STK32AQ8WU08 396 aa24.63■■□□□ 1.53
SYMPK-212ENST00000598896 PIWIL1Q96J94 861 aaKnown RBP24.63■■□□□ 1.53
SYMPK-212ENST00000598896 MCEEQ96PE7 176 aa24.63■■□□□ 1.53
SYMPK-212ENST00000598896 OSBPL9Q96SU4 736 aa24.63■■□□□ 1.53
SYMPK-212ENST00000598896 DUSP16Q9BY84 665 aa24.63■■□□□ 1.53
SYMPK-212ENST00000598896 TMEM30AQ9NV96 361 aa24.63■■□□□ 1.53
SYMPK-212ENST00000598896 OAZ2O95190 189 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 COMTP21964 271 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 FPGSQ05932 587 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 FUT10Q6P4F1 479 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 CLEC20AQ6ZU45 233 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 ZNF365Q70YC5 407 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 FAM35AQ86V20 835 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 NLRC5Q86WI3 1866 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 THEM5Q8N1Q8 247 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 COG1Q8WTW3 980 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 MYLPFQ96A32 169 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 HES6Q96HZ4 224 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 MED10Q9BTT4 135 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 KRT82Q9NSB4 513 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 SF3B1O75533 1304 aaKnown RBP eCLIP24.62■■□□□ 1.531e-6■■■□□ 17.2
SYMPK-212ENST00000598896 TMEM191CA6NGB0 347 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 SYN3O14994 580 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 NPR3P17342 541 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 ZNF252P-AS1Q0IIN9 211 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 PPIGQ13427 754 aaKnown RBP eCLIP24.62■■□□□ 1.537e-7■■□□□ 12.9
SYMPK-212ENST00000598896 ZNF268Q14587 947 aaPredicted RBP24.62■■□□□ 1.53
SYMPK-212ENST00000598896 VARS2Q5ST30 1063 aaKnown RBP24.62■■□□□ 1.53
SYMPK-212ENST00000598896 FAM183BPQ6ZVS7 135 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 TMEM110Q86TL2 294 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 LRRN4CLQ8ND94 238 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 MCRS1Q96EZ8 462 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 RHOBTB2Q9BYZ6 727 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 AMFRQ9UKV5 643 aa24.62■■□□□ 1.53
SYMPK-212ENST00000598896 MYO1FO00160 1098 aa24.61■■□□□ 1.53
SYMPK-212ENST00000598896 PRLRP16471 622 aa24.61■■□□□ 1.53
SYMPK-212ENST00000598896 SYN1P17600 705 aa24.61■■□□□ 1.53
SYMPK-212ENST00000598896 PLA2G4AP47712 749 aa24.61■■□□□ 1.53
SYMPK-212ENST00000598896 RPL34P49207 117 aaKnown RBP24.61■■□□□ 1.53
SYMPK-212ENST00000598896 CACNA2D1P54289 1103 aa24.61■■□□□ 1.53
SYMPK-212ENST00000598896 OGDHQ02218 1023 aa24.61■■□□□ 1.53
SYMPK-212ENST00000598896 RPS6KA1Q15418 735 aa24.61■■□□□ 1.53
SYMPK-212ENST00000598896 CEP57Q86XR8 500 aa24.61■■□□□ 1.53
SYMPK-212ENST00000598896 WDR35Q9P2L0 1181 aa24.61■■□□□ 1.53
SYMPK-212ENST00000598896 XPO1O14980 1071 aaKnown RBP24.6■■□□□ 1.53
SYMPK-212ENST00000598896 OR4Q2P0C623 313 aa24.6■■□□□ 1.53
SYMPK-212ENST00000598896 FGFR3P22607 806 aa24.6■■□□□ 1.53
SYMPK-212ENST00000598896 ALDH7A1P49419 539 aaKnown RBP24.6■■□□□ 1.53
SYMPK-212ENST00000598896 PIGZQ86VD9 579 aa24.6■■□□□ 1.53
SYMPK-212ENST00000598896 JOSD2Q8TAC2 188 aa24.6■■□□□ 1.53
SYMPK-212ENST00000598896 SELENOOQ9BVL4 669 aa24.6■■□□□ 1.53
SYMPK-212ENST00000598896 METTL5Q9NRN9 209 aaKnown RBP24.6■■□□□ 1.53
SYMPK-212ENST00000598896 PTPRDP23468 1912 aa24.6■■□□□ 1.53
SYMPK-212ENST00000598896 SIGLEC16A6NMB1 481 aa24.6■■□□□ 1.53
SYMPK-212ENST00000598896 ZBBXA8MT70 800 aa24.6■■□□□ 1.53
SYMPK-212ENST00000598896 FAM200BP0CF97 657 aa24.6■■□□□ 1.53
SYMPK-212ENST00000598896 KRT3P12035 628 aa24.6■■□□□ 1.53
SYMPK-212ENST00000598896 TCP1P17987 556 aaKnown RBP24.6■■□□□ 1.53
SYMPK-212ENST00000598896 RFC1P35251 1148 aaPredicted RBP24.6■■□□□ 1.53
SYMPK-212ENST00000598896 DAB2IPQ5VWQ8 1189 aa24.6■■□□□ 1.53
SYMPK-212ENST00000598896 DCUN1D2Q6PH85 259 aa24.6■■□□□ 1.53
SYMPK-212ENST00000598896 TAS1R1Q7RTX1 841 aa24.6■■□□□ 1.53
SYMPK-212ENST00000598896 CXXC1Q9P0U4 656 aaPredicted RBP24.6■■□□□ 1.53
SYMPK-212ENST00000598896 PAPSS1O43252 624 aaPredicted RBP24.59■■□□□ 1.53
SYMPK-212ENST00000598896 EFEMP2O95967 443 aa24.59■■□□□ 1.53
SYMPK-212ENST00000598896 FGBP02675 491 aa24.59■■□□□ 1.53
SYMPK-212ENST00000598896 RABGGTBP53611 331 aa24.59■■□□□ 1.53
SYMPK-212ENST00000598896 TSPY1Q01534 308 aa24.59■■□□□ 1.53
SYMPK-212ENST00000598896 TUBB2AQ13885 445 aa24.59■■□□□ 1.53
SYMPK-212ENST00000598896 MRPL58Q14197 206 aaKnown RBP24.59■■□□□ 1.53
SYMPK-212ENST00000598896 RTP2Q5QGT7 225 aa24.59■■□□□ 1.53
SYMPK-212ENST00000598896 OLFML1Q6UWY5 402 aa24.59■■□□□ 1.53
SYMPK-212ENST00000598896 SCUBE3Q8IX30 993 aa24.59■■□□□ 1.53
SYMPK-212ENST00000598896 ZMIZ2Q8NF64 920 aa24.59■■□□□ 1.53
SYMPK-212ENST00000598896 CD101Q93033 1021 aa24.59■■□□□ 1.53
SYMPK-212ENST00000598896 CAPZA3Q96KX2 299 aa24.59■■□□□ 1.53
SYMPK-212ENST00000598896 KCNK16Q96T55 309 aa24.59■■□□□ 1.53
SYMPK-212ENST00000598896 SMOQ99835 787 aa24.59■■□□□ 1.53
SYMPK-212ENST00000598896 TUBB2BQ9BVA1 445 aa24.59■■□□□ 1.53
SYMPK-212ENST00000598896 CARD6Q9BX69 1037 aa24.59■■□□□ 1.53
SYMPK-212ENST00000598896 MRPL42Q9Y6G3 142 aaKnown RBP24.59■■□□□ 1.53
SYMPK-212ENST00000598896 DDX3YO15523 660 aaKnown RBP24.58■■□□□ 1.53
SYMPK-212ENST00000598896 PROSCO94903 275 aa24.58■■□□□ 1.53
SYMPK-212ENST00000598896 MAP3K7CLP57077 242 aa24.58■■□□□ 1.53
SYMPK-212ENST00000598896 BTG3Q14201 252 aaPredicted RBP24.58■■□□□ 1.53
SYMPK-212ENST00000598896 TMEM240Q5SV17 173 aa24.58■■□□□ 1.53
SYMPK-212ENST00000598896 FAM102AQ5T9C2 384 aaPredicted RBP24.58■■□□□ 1.53
SYMPK-212ENST00000598896 OR6B2Q6IFH4 312 aa24.58■■□□□ 1.53
SYMPK-212ENST00000598896 CREG2Q8IUH2 290 aa24.58■■□□□ 1.53
SYMPK-212ENST00000598896 CMTR2Q8IYT2 770 aaKnown RBP24.58■■□□□ 1.53
SYMPK-212ENST00000598896 EMC1Q8N766 993 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms