RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 NUP210Q8TEM1 1887 aaPredicted RBP14.69□□□□□ -0.06
SCAF1-203ENST00000598359 NCOR2Q9Y618 2525 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 CLDN5O00501 218 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 MAN2B1O00754 1011 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 PDXKO00764 312 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 LAMTOR5O43504 91 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 RHOBTB3O94955 611 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 ZNF202O95125 648 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 C4BPAP04003 597 aaKnown RBP14.69□□□□□ -0.06
SCAF1-203ENST00000598359 CACNA2D1P54289 1103 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 CSTF1Q05048 431 aaKnown RBP14.69□□□□□ -0.06
SCAF1-203ENST00000598359 TXNDC11Q6PKC3 985 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 C4orf50Q6ZRC1 276 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 SLC9A9Q8IVB4 645 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 BPIFB1Q8TDL5 484 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 MRPS31Q92665 395 aaKnown RBP14.69□□□□□ -0.06
SCAF1-203ENST00000598359 USP13Q92995 863 aaPredicted RBP14.69□□□□□ -0.06
SCAF1-203ENST00000598359 FUBP3Q96I24 572 aaKnown RBP eCLIP14.69□□□□□ -0.06
SCAF1-203ENST00000598359 SLC22A12Q96S37 553 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 CYP2S1Q96SQ9 504 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 NELL2Q99435 816 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 SDCBP2Q9H190 292 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 TRPC7Q9HCX4 862 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 TMEM30AQ9NV96 361 aa14.69□□□□□ -0.06
SCAF1-203ENST00000598359 MRPS17Q9Y2R5 130 aaKnown RBP14.69□□□□□ -0.06
SCAF1-203ENST00000598359 A8MXQ7 604 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 TACC1O75410 805 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 MYL1P05976 194 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 PTPN1P18031 435 aaKnown RBP14.68□□□□□ -0.06
SCAF1-203ENST00000598359 AVPR1AP37288 418 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 GRIK1P39086 918 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 MAGEA11P43364 429 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 USP46P62068 366 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 MTAPQ13126 283 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 PNOCQ13519 176 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 NCOA4Q13772 614 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 ZNF699Q32M78 642 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 ARHGAP29Q52LW3 1261 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 WDR44Q5JSH3 913 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 C1orf220Q5T0J3 134 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 TRIM68Q6AZZ1 485 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 DGLUCYQ7Z3D6 616 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 MON1AQ86VX9 555 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 SMYD4Q8IYR2 804 aaPredicted RBP14.68□□□□□ -0.06
SCAF1-203ENST00000598359 CELF5Q8N6W0 485 aaKnown RBP14.68□□□□□ -0.06
SCAF1-203ENST00000598359 MYCBPAPQ8TBZ2 947 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 SYAP1Q96A49 352 aaPredicted RBP14.68□□□□□ -0.06
SCAF1-203ENST00000598359 RMDN1Q96DB5 314 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 TRMT2BQ96GJ1 504 aaKnown RBP14.68□□□□□ -0.06
SCAF1-203ENST00000598359 LMAN1LQ9HAT1 526 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 GKN1Q9NS71 199 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 RBM12Q9NTZ6 932 aaKnown RBP14.68□□□□□ -0.06
SCAF1-203ENST00000598359 OBP2AQ9NY56 170 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 PATJQ8NI35 1801 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 CACNA1IQ9P0X4 2223 aa14.68□□□□□ -0.06
SCAF1-203ENST00000598359 OBSL1O75147 1896 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 CEP250Q9BV73 2442 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 C2orf78A6NCI8 922 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 F8VP50 259 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 SPECC1L-ADORA2AF8WAN1 911 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 NCAM2O15394 837 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 CALUO43852 315 aaPredicted RBP14.67□□□□□ -0.06
SCAF1-203ENST00000598359 STAU1O95793 577 aaKnown RBP14.67□□□□□ -0.06
SCAF1-203ENST00000598359 TRIM49P0CI25 452 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 TRIM49CP0CI26 452 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 WEE1P30291 646 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 ATICP31939 592 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 RPS9P46781 194 aaKnown RBP14.67□□□□□ -0.06
SCAF1-203ENST00000598359 CLDN10P78369 228 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 ORC1Q13415 861 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 SPOPLQ6IQ16 392 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 B3GALNT2Q8NCR0 500 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 ERCC4Q92889 916 aaPredicted RBP14.67□□□□□ -0.06
SCAF1-203ENST00000598359 CCDC47Q96A33 483 aaKnown RBP14.67□□□□□ -0.06
SCAF1-203ENST00000598359 EEF2KMTQ96G04 330 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 MYRFLQ96LU7 910 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 B3GNT5Q9BYG0 378 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 ZNF518BQ9C0D4 1074 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 TDP1Q9NUW8 608 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 UXTQ9UBK9 157 aaPredicted RBP14.67□□□□□ -0.06
SCAF1-203ENST00000598359 TRAF3IP3Q9Y228 551 aa14.67□□□□□ -0.06
SCAF1-203ENST00000598359 F5P12259 2224 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 OTOL1A6NHN0 477 aaPredicted RBP14.66□□□□□ -0.06
SCAF1-203ENST00000598359 AKAP3O75969 853 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 CHRNB1P11230 501 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 ARSAP15289 507 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 NR2F2P24468 414 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 DDX6P26196 483 aaKnown RBP eCLIP14.66□□□□□ -0.06
SCAF1-203ENST00000598359 CTHP32929 405 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 GAS6Q14393 721 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 PON2Q15165 354 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 MAPRE1Q15691 268 aaKnown RBP14.66□□□□□ -0.06
SCAF1-203ENST00000598359 KLHL40Q2TBA0 621 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 ZNF667Q5HYK9 610 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 VSTM1Q6UX27 236 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 SV2AQ7L0J3 742 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 FMR1NBQ8N0W7 255 aaPredicted RBP14.66□□□□□ -0.06
SCAF1-203ENST00000598359 ARL14EPQ8N8R7 260 aaPredicted RBP14.66□□□□□ -0.06
SCAF1-203ENST00000598359 TMEM174Q8WUU8 243 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 EBF3Q9H4W6 596 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms